Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00165 ATGGGTGACGCTGAGATCAAGACACCAATTGAGGTAGTTGTATGTGGTTCCATGAACAATACCACCAATGCAAACAACCATGCCCACCAAAACGACATCACCAAGCCATCACAAGTACCAATCTTAACCAAGCTCCATGCAGGGTACTTTTTCATATGTCTTTCCTTTGGTGCACAAGCTTTGCTGTGGAAGAGCTTGAGTGAACATAACAAGGACTCACAAACTCTGTGGCATGGATTTAATTTGATGCCTTCCGTTGCATATCTCCTACTTTGGTGCCTCTCAGTGCTTATTGCAACTATCCTATCTGTGCTTTACATGCTCAAGTGCATCTTGCACTTTGATATGGTGAAGAAGGAGTTTTCACACCACATTGGAGTGAACTACATGTATACTCCTTGGATTTCTGGCCTTCTGATGCTTCAATCAGCACCAGTGATAGTTCCTAGAACTTGTTATTACTACCAATATCTCTGTTTGGCCTTTTCATTTGTGATATTGATGCTTGATGTGAAACTATATGGACAATGGTTCACAACTGAAAAACGGTTTCTGTCAGTTGTAGCAAACCCAGTAAGCCAGGTTTCAGTTATAGGAAACTTGGTGGCTGCTCAAGTGATGACAGAAATTGATTGGAAAGAGAGTGCACTAACAATGTTTTCATTGGGAATGGTACATTATTTAATTCTATTTGTAACGCTATATCAGCGTTTGACAAGTAGCAACCAGTTTCCCAAAGGGCTAAGGCCAGCTTATTTGTTGTCATTTGCTGCACCAAGCATGGCAAGTCTAGCTTGGAAATCAATCTCAGGTGCTTTTCTCATCCCATCAAAGATGCTGTTCTTTCTCTCTTTGTTCCTTTTTATGTCTCAGGCTTGCAGGCCAGCTTTCTTCAAGAAATCAATGAAAAGGTTAAATGTTACATGGTGGGTCTATTCATTCCCTTTGACAATCCTTGGTCTAGCTTGTGCGGAATATGCTCAACAAGTGAAAGCTAGCATGGCCTCTGCATTAATGCTGGTCATATGTATTGTCTCTGTGCTGGTTTTCTTTTGTTTGATGATGATCACTGTACTCAAAATTGAGAGGATGCTGCTTAAAAAAGCTCCCATTATGAGCTGTAAATGA 1128 0.4087 MGDAEIKTPIEVVVCGSMNNTTNANNHAHQNDITKPSQVPILTKLHAGYFFICLSFGAQALLWKSLSEHNKDSQTLWHGFNLMPSVAYLLLWCLSVLIATILSVLYMLKCILHFDMVKKEFSHHIGVNYMYTPWISGLLMLQSAPVIVPRTCYYYQYLCLAFSFVILMLDVKLYGQWFTTEKRFLSVVANPVSQVSVIGNLVAAQVMTEIDWKESALTMFSLGMVHYLILFVTLYQRLTSSNQFPKGLRPAYLLSFAAPSMASLAWKSISGAFLIPSKMLFFLSLFLFMSQACRPAFFKKSMKRLNVTWWVYSFPLTILGLACAEYAQQVKASMASALMLVICIVSVLVFFCLMMITVLKIERMLLKKAPIMSCK. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00165 375 Pfam Voltage-dependent anion channel 45 358 IPR004695 GO:0016020|GO:0055085
Seca12g00165 375 Gene3D - 39 366 IPR038665 -
Seca12g00165 375 FunFam S-type anion channel SLAH1 39 365 - -
Seca12g00165 375 PANTHER S-TYPE ANION CHANNEL SLAH3 32 360 IPR030183 GO:0006873|GO:0008308|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00165 Seca-Chr12 1530692 1532250 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00165 K26672 - gmx:100799838 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00165 12 1530692 1532250 Seca12g00165 12 1530692 1532250 ECH
Seca4g04590 4 84605646 84606881 Seca12g00165 12 1530692 1532250 ECH