Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00159 ATGGAAAGGTCTTTTCCTTTGATTCTATTTCTCTTTGTCATGTCAATGCCTCTTTCATTTGGGATAAAACAAAACCAACTTCATTACAACTACTACACGTTTTCATGTCCAAATTTGGAAAGTGTAATCAAAAGTGAATTGCTAAGCTTATTCTTGAGAGATGCTACTGCACCAGCAGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAGGGATGTGATGCCTCCATTTTGTTGGACTCCAATGGTAGCTCTGAAATGATTTCTTCAAGAAACTTTGCCATCAGATACAGGGAAATAATCAGCCACATAAAATCAATATTAGAAGAAGAATGTCCAGGAAAAGTGTCATGTGCAGATATCATTGTATTAGCTGCTAAGGAAGCAGTGTCATTCTCTGGAGGACCCCTTATTCAGATACCACTTGGAAGAAAAGATTCCAAAACTTGCAGTTTCAAGGAGGCTGATGCTAAGCTTCCTTCACCCACAATAACGGTTGATGAATTTATATCCATTTTCATGTCTAAAGGAATGAGCATTGAAGAATCCGTTTCCATTCTAGGGGCACATACACTAGGTGTTGGACACTGCTTAAACATTGTTGGCAGATTGTATGATCAAAGGATAGGGGATGAGATGGATTTGAATTTTGAAGCCTCACTAAGACTAGCATGCCCAACTGAGATTCCTCTAACAAACCTCACATTTGTGCCTAATGACATGACCCCCATTATATTTGACAACCACTATTACCGAGACATCATAATGGGGAGAGGTTTGTTTGGTATTGACTCAAACATTTCTAGAGATCCCCGAACTGCACCTTTTGTCATGAGGTTTGCTTTGGATCAGAATTACTTCTTCGAGGCTTTCTCATCTGCATTTCTTAAGCTTTCTACTACCAATGTTCTCACAAATGAGCAGGGTGATGTTCGAAGGCAATGCAACCAGTTAAACTAA 963 0.3946 MERSFPLILFLFVMSMPLSFGIKQNQLHYNYYTFSCPNLESVIKSELLSLFLRDATAPAAFLRLMFHDCQVQGCDASILLDSNGSSEMISSRNFAIRYREIISHIKSILEEECPGKVSCADIIVLAAKEAVSFSGGPLIQIPLGRKDSKTCSFKEADAKLPSPTITVDEFISIFMSKGMSIEESVSILGAHTLGVGHCLNIVGRLYDQRIGDEMDLNFEASLRLACPTEIPLTNLTFVPNDMTPIIFDNHYYRDIIMGRGLFGIDSNISRDPRTAPFVMRFALDQNYFFEAFSSAFLKLSTTNVLTNEQGDVRRQCNQLN. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00159 320 Gene3D Peroxidase, domain 2 161 299 - -
Seca12g00159 320 ProSiteProfiles Plant heme peroxidase family profile. 26 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 Gene3D - 30 320 - -
Seca12g00159 320 FunFam Peroxidase 161 299 - -
Seca12g00159 320 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 Pfam Peroxidase 46 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 CDD secretory_peroxidase 26 317 IPR033905 GO:0004601|GO:0042744
Seca12g00159 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 PANTHER - 8 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00159 320 SUPERFAMILY Heme-dependent peroxidases 26 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00159 Seca-Chr12 1503941 1506033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00159 73 320 Peroxidase AT3G17070 51.953 1.40e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00159 K00430 - gmx:100806951 541.576