Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00151 ATGGCCAAAAGGACTAGTGTTGCTTCCATAGCTTTACCATCTTTAAGCATTTTCATTTCCATCTTCTTCGTTTCAATAACTTGCTTTCAAGAAGAGCGATCCATATACTTGGTCTTGTTAGAAGGAGACGCGGTTGCTTTCCATGAAGGTTCATCAAGAATTGACCCCAACAGATTTGCTCTGTGTGCATGGCTAATTAGTGAAACCTCGAAGGCATATGCAAAGCACTTATTGGCATCTCACGATCTGCTTCTGCAAAACGCTTTGGAGAATGGAAGCTACAAAAAACTCCACAGTTTCAAACACATTATTAATGGTTTCTCTGTCCACACAACCCGTTCCCAGGCTAGAAGACTGAGAGGTACCGATGGAGTGAAGTTGGTAGAGAAAGACAGAGGAGCAAAATTGATGACAACATACACTCCCAAGTTTCTGAATTTACCGAAAGGAATATGGGCACAGGAAGGAGGAGACAAAAACGCAGGTGATGGAGTTGTGATTGGTTTTGTTGATAGTGGCATCAATCCAGTTCATCCCAGCTTTGCTTATGATCCAATGCAACCTTTCTCATCAAACCTCTCTAATTTTGCGGGTGCATGTATGACGGGTCCATTATTCTCAGCTAGTTGTTGCAATGGAAAGATACTCTCAGCGAGGTACTTCTCAGCTGGGGCTCAAACTATTGCTACCCTTAATGCTTCAGTGGATCTTCTTTCACCTTTTGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATTTTGGTGTTCCCGTTATTGTGAATAATTTTTTCTATGGGCGAGCCAGTGGAATGGCACCACGTGCAAGGATTGCTGTTTACAAGGCTATTTATCCAACTGTGGGAACTCTAGCAGATGTTATTGCAGCTATTGATCAGGCTGTTCTGGATGGGGTGGATATCTTAACACTCTCTATTGGACCAAAGGAACCACCACAAGACACATTGACCTTCTTGAGCATATTTGATATTGCCTTGTTATTTGCACGAAAAGCAGGAGTTTTTGTGGTGCAAGCTGCAGGAAATAATGGTCCTTCATCTTCAACTGTAATGTCATTCGGTCCCTGGACTGTGGGTGTTGCAGCTTGCAACACAGACAGAAGGTACCCTGCTTCACTTCTTCTTGGAAATGGCCAAATACTAGATGGTGTGGGACTATCAGGACCAAGTTTTGGAAATGGGACAGTTTATCATAAGCTTGTATTAGCTAAGGATGCAGTAAAAATAAATGGAACATTCCCATGGACTCAGGAGTACATAGAAGAGTGCCAACATCCAGAAATTTTTGACCATAATATAGTTTCAGGAAGTATCATTATCTGCAACTTCTCAGTTGGCTTCTACAATGGAACCTCAACTCTTGCTGCCATTATTCACACAGCAAAAGTTCTAGGATTCGAGGGTTTTATTCTAGCTGCGAACCCAAGATATGGTGATTATATTGCAGAGCCAATTCCTTTCGATATTTCTGGTATTTTGATCCCTCATGTAGCTGATGTCAAGGTTATATCAGAGTATTATGAAGAACAAACCAAGAGAGATGAGAGAGGAATTGCCACAGAATTTTGTGCTGCAGCAGCTGTGGGGGAAGGAAGAGTCGCTTCTTTCACAGGGCGATCACCCGTTGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACACTCAAAAAAATCCTGTTGATGTACTTAAACCTGATATTCTTGCTCCAGGGCACCAAATATGGGGAGCATGGAGCCCCATTAGTGCCTTGCAACCTCTGCTGATAGGGCAAGATTTTGCATTACTATCTGGTACCAGCATGGCCTCACCACATGTGGCTGGAATCGCAGCACTTATCAAGCAATATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATCTCCACAACCAGCTCAAAGTATGATAATCTTGGAGAGGATATCATGGCTGAAGGCTATGAAATCAACAGCTTGTATCCCTCCACTCCTTTTGAATATGGGGCGGGCATTGTGAGCCCCAACTGTGCCATTGATCCAGGGTTAGTACTATCATCAGGTTATGCAGACTTCATCAGCTTCTTGTGCTCTTTGCCAAACATCAACAGTGATACAGTAGTTGCAGCCACTGGAGAATCTTGCAATAACCCGTTTGAGTATCCATCCAATCTAAACCTTCCTTCAGTAACCATATCTTCACTAAGAGGAACAGTTTCTGTCCGAAGAACTGTCATGAATGTAGGGAACGTCACAGAGACATACTTAGGCTCAGTTCTACCTCCAAATGGAACTACTGTCAACCTGTATCCAACTCGGTTTACCATAAGTCCACAAGGAACACAAGATCTGGTAATACAACTAAGTGTCATCCAATCAATGGAAAGTTTTAACTTTGGTGAAATTGTTTTGACAGGAGATTTGAACCATATTGTAAGAATAACATTATCAGTCGTACCAATTTCAGTATAA 2484 0.4235 MAKRTSVASIALPSLSIFISIFFVSITCFQEERSIYLVLLEGDAVAFHEGSSRIDPNRFALCAWLISETSKAYAKHLLASHDLLLQNALENGSYKKLHSFKHIINGFSVHTTRSQARRLRGTDGVKLVEKDRGAKLMTTYTPKFLNLPKGIWAQEGGDKNAGDGVVIGFVDSGINPVHPSFAYDPMQPFSSNLSNFAGACMTGPLFSASCCNGKILSARYFSAGAQTIATLNASVDLLSPFDADGHGSHVASIAAGNFGVPVIVNNFFYGRASGMAPRARIAVYKAIYPTVGTLADVIAAIDQAVLDGVDILTLSIGPKEPPQDTLTFLSIFDIALLFARKAGVFVVQAAGNNGPSSSTVMSFGPWTVGVAACNTDRRYPASLLLGNGQILDGVGLSGPSFGNGTVYHKLVLAKDAVKINGTFPWTQEYIEECQHPEIFDHNIVSGSIIICNFSVGFYNGTSTLAAIIHTAKVLGFEGFILAANPRYGDYIAEPIPFDISGILIPHVADVKVISEYYEEQTKRDERGIATEFCAAAAVGEGRVASFTGRSPVVSRFSSRGPDIIDTQKNPVDVLKPDILAPGHQIWGAWSPISALQPLLIGQDFALLSGTSMASPHVAGIAALIKQYNPSWTPSMIASAISTTSSKYDNLGEDIMAEGYEINSLYPSTPFEYGAGIVSPNCAIDPGLVLSSGYADFISFLCSLPNINSDTVVAATGESCNNPFEYPSNLNLPSVTISSLRGTVSVRRTVMNVGNVTETYLGSVLPPNGTTVNLYPTRFTISPQGTQDLVIQLSVIQSMESFNFGEIVLTGDLNHIVRITLSVVPISV. 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00151 827 ProSitePatterns Serine proteases, subtilase family, serine active site. 609 619 IPR023828 -
Seca12g00151 827 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 167 178 IPR023827 -
Seca12g00151 827 ProSiteProfiles Serine proteases, subtilase domain profile. 139 683 - -
Seca12g00151 827 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 95 820 IPR045051 -
Seca12g00151 827 PRINTS Subtilisin serine protease family (S8) signature 162 181 IPR015500 -
Seca12g00151 827 PRINTS Subtilisin serine protease family (S8) signature 608 624 IPR015500 -
Seca12g00151 827 PRINTS Subtilisin serine protease family (S8) signature 242 255 IPR015500 -
Seca12g00151 827 Gene3D - 700 824 - -
Seca12g00151 827 Gene3D - 376 544 - -
Seca12g00151 827 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 136 IPR037045 -
Seca12g00151 827 ProSitePatterns Serine proteases, subtilase family, histidine active site. 246 256 IPR022398 -
Seca12g00151 827 Pfam Fibronectin type-III domain 728 822 IPR041469 -
Seca12g00151 827 Gene3D Peptidase S8/S53 domain 164 696 IPR036852 GO:0004252|GO:0006508
Seca12g00151 827 SUPERFAMILY Subtilisin-like 136 687 IPR036852 GO:0004252|GO:0006508
Seca12g00151 827 CDD PA_subtilisin_like 382 517 - -
Seca12g00151 827 CDD Peptidases_S8_3 135 645 IPR034197 -
Seca12g00151 827 Pfam Peptidase inhibitor I9 69 136 IPR010259 -
Seca12g00151 827 Pfam Subtilase family 162 647 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00151 Seca-Chr12 1432790 1436778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00151 35 825 Subtilisin-like Serine Gene Family AT1G62340 62.281 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00151 - - gmx:100798915 1249.19