Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00074 ATGTGGTCCCGTAACCATTCAGTTTTCTTTTTATTTTCAATCACTCTCTTTTTTCTGTTCCAAGCACCTGCTTTTGCAGCGAAAAAGTCTTACATAGTGTACTTGGGATCGCACAACCATGGTGAAGGAGCTACAGATGCTGACTTTGATCGAGTTTCAGAAACTCACCATGAATTCCTTCAATCCTATTTGGGAAGCTCCGATAAAGCAAAAGAGGCAATGATATATTCTTACACAAGGCATATCAATGGCTTTGCTGCCATGCTCGAAGAGAAAGAGGCTGCTGACATTGCAAAACATCCAAGCGTTGTGTCAGTATTCTTGAACAAAGGAAGAAAACTACACACTACGCATTCGTGGGAATTCATGTCAATGGATAAGAATGGTGTAGCTCCTTCTGATTCTCTGTTTAGTAAATCCAGTTATGGTGAAGATTCTATTATTGGTCATCTTGACACTGGTGTATGGCCAGAATCTCCGAGCTTTGGTGACGAGGGAATGGGACCCATTCCTTCAAGGTGGAAAGGAACTTGTGAGAATGATATGACTGGCTTCCGTTGCAACAGGAAGTTGATAGGAGCAAGGTACTTCAACAAAGGTTATGGTGCATATGCGGGTTCCAAAGTAATGAGAAACAGTACGCTTAACAGTCCACGAGACTATGAGGGTCATGGATCTCACACACTATCAACCATAGGAGGAAACTTTGTCCCTGGAGCAAGTATTTTTGGGTTGGGTAATGGAACTGCCAAAGGTGGTTCTCCCAGAGCCAGGGTTGCTACTTACAAGGTGTGCTGGCCACCCATTGATGGCAATGAGTGCTTTGATGCTGATATCATGGCAGCCTTTGATATGGCCATCCATGATGGTGTTGATGTTCTTTCCCTCTCTCTCGGAGGCCTTCCCAGTGATTATTTCGATGATGGTCTTTCCATTTCTGCATTCCATGCTGTTAAGAAGGGCATCACTGTTCTCTGCTCCGCTGGAAATTCTGGACCCTTTAAGGAAACTGTTTCAAATATCTCACCTTGGATATTAACCGTTGCTGCAAGTACCTTGGACAGAGAGTTTGATTCCGATGTTGAACTCCACAATGGACAGATCTTCAGGGGAGCAAGCCTTTCTAAAGGTTTGCCAGAAGATAAGCTTTACCCACTCATTAGGGCTGATCAGGCAAAGCTGGCTTCAGCATCAGTAGCAGACGCTATTCTGTGCAAGAAAGAGACAATTGATCCGGAGAAGGTGAAAGGGAAAATATTGGTTTGTCTTCGAGGTGAGACTGCAAGAGTGGAAAAGAGCCTTGTTGCTTTGGAGGCTGGTGCATCAGGGATGATTCTTTGTAATGATGAACCTGATGGGAATGGCCTTATTGCTGATCCTCATTTCCTCCCTGCATCACAAATTACTTATGAAGATGGTCAAGCTGTCTTTGCCTACATCAATTCAACCAAGAACCCGCTAGGATATATTCGTCCACCGATAACAAAGTATCAGATAAAGCCGAATCCAAGCATGGCAGGATTCTCATCTAGAGGTCCTAACTTTGTGACACCAGAGATCCTGAAGCCTGATGTGACTGCTCCTGGTGTCAACATCATTGCTGCCTACTCAGGAGCCGTTAGCCCTACAGAGACTGATTTTGATACGCGTAGGGTTCCTTTCATCACAATGTCCGGAACCTCCATGTCTTGCCCTCATGTCGCTGGAGTTGCTGGCCTTCTCAAGACTCTGTATCCTCATTGGAGTCCTGCAGCTATTAAGTCTGCAATCATGACAACTACTAGGACAAGGGATAACACTGGTAAGGCAATGCTTGATGTCGATGGGAAAAAGGCAACACCATTTGCCTATGGATCTGGCCACATTAGACCAAATCGTGCAATGGATCCTGGCTTGATCTATGACTTAACCGTCAATGATTACCTAGACTTTCTCTGTCTCCTTGGTTATAACCAGACTCAGATCCAACTTTTCTCTGGTGCTCCTCATTATCGTTGTCCTGATTCAACAATGAACCTCCTGGATTTCAATTACCCTACCATGGCAATCCCTAAATTGTATGGCTCAGTTACTTTGACGAGGAGGCTGAAAAATGTTGGTTCACCAGGGACTTACAAAGCAACCATCCGTGTACCCGCAGGCGTTTCCATTTCTGTGAAGCCTGATACATTGAAATTTGAAGAGATTGGTGAAGAGAAGAGCTTTAAATTAACAGTGGAAGTTACAAGGTCAGGTGTGGGTACAGTATTTGGAGGAATCACTTGGTCAGATGGCAAGCACTATGTCAGGAGTCCAATTGCAATTGGCGGCGTTAGAGCATAG 2322 0.4462 MWSRNHSVFFLFSITLFFLFQAPAFAAKKSYIVYLGSHNHGEGATDADFDRVSETHHEFLQSYLGSSDKAKEAMIYSYTRHINGFAAMLEEKEAADIAKHPSVVSVFLNKGRKLHTTHSWEFMSMDKNGVAPSDSLFSKSSYGEDSIIGHLDTGVWPESPSFGDEGMGPIPSRWKGTCENDMTGFRCNRKLIGARYFNKGYGAYAGSKVMRNSTLNSPRDYEGHGSHTLSTIGGNFVPGASIFGLGNGTAKGGSPRARVATYKVCWPPIDGNECFDADIMAAFDMAIHDGVDVLSLSLGGLPSDYFDDGLSISAFHAVKKGITVLCSAGNSGPFKETVSNISPWILTVAASTLDREFDSDVELHNGQIFRGASLSKGLPEDKLYPLIRADQAKLASASVADAILCKKETIDPEKVKGKILVCLRGETARVEKSLVALEAGASGMILCNDEPDGNGLIADPHFLPASQITYEDGQAVFAYINSTKNPLGYIRPPITKYQIKPNPSMAGFSSRGPNFVTPEILKPDVTAPGVNIIAAYSGAVSPTETDFDTRRVPFITMSGTSMSCPHVAGVAGLLKTLYPHWSPAAIKSAIMTTTRTRDNTGKAMLDVDGKKATPFAYGSGHIRPNRAMDPGLIYDLTVNDYLDFLCLLGYNQTQIQLFSGAPHYRCPDSTMNLLDFNYPTMAIPKLYGSVTLTRRLKNVGSPGTYKATIRVPAGVSISVKPDTLKFEEIGEEKSFKLTVEVTRSGVGTVFGGITWSDGKHYVRSPIAIGGVRA. 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00074 773 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Seca12g00074 773 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Seca12g00074 773 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Seca12g00074 773 Pfam Subtilase family 144 618 IPR000209 GO:0006508|GO:0008236
Seca12g00074 773 Gene3D Peptidase S8/S53 domain 146 641 IPR036852 GO:0004252|GO:0006508
Seca12g00074 773 FunFam Subtilisin-like protease SBT1.5 145 373 - -
Seca12g00074 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Seca12g00074 773 ProSiteProfiles Serine proteases, subtilase domain profile. 119 628 - -
Seca12g00074 773 CDD PA_subtilisin_like 360 490 - -
Seca12g00074 773 SUPERFAMILY Subtilisin-like 114 632 IPR036852 GO:0004252|GO:0006508
Seca12g00074 773 Pfam PA domain 408 475 IPR003137 -
Seca12g00074 773 Gene3D - 645 770 - -
Seca12g00074 773 FunFam Subtilisin-like protease SBT5.3 19 115 - -
Seca12g00074 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Seca12g00074 773 SUPERFAMILY PA domain 412 484 IPR046450 -
Seca12g00074 773 CDD Peptidases_S8_3 113 593 IPR034197 -
Seca12g00074 773 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Seca12g00074 773 FunFam subtilisin-like protease SBT1.5 354 497 - -
Seca12g00074 773 Pfam Fibronectin type-III domain 675 768 IPR041469 -
Seca12g00074 773 Gene3D - 354 497 - -
Seca12g00074 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 767 IPR045051 -
Seca12g00074 773 FunFam Subtilisin-like protease SBT1.5 645 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00074 Seca-Chr12 770771 775127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00074 14 768 Subtilisin-like Serine Gene Family AT5G59810 62.665 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00074 - - gmx:100808488 1190.64