Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00061 ATGGCAACTGGTGAAAACAATCTGAAGCTATATTCTCACTGGATGAGCTCTTGTTCCTTCCGTGTTCGATTTGCTCTTAACCTCAAAGGTCTGAAATATGAGTACGAAGCATGCAATCTCCAGCGAATTTCTGACCCCGAGTTTCAGAAGCTCAATCCTGTTGGGTATGTTCCCGTGCTAGTGGATGGTGATGTAGTAATTGTTGACTCTTTTGCCATTATTATGTATTTGGAAGATAAGTATCCTCACCATCCTCTGCTGCCTCATGATATTCATAAGAGAGCAATCAATTTCCAGGTTGCCAATATTGTTTCCTCAGCTATACAGCCTTTTCAAAACTTAACTGTAGCGAAGTACATTGAGGAAAAGGTTGGCCCAGATGAAAAACTTCCTTGGACCCAGAGTGTAATGGGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGACCATGCAAGAAGATATGCAACTGGAGATGAAATTTTCCTGGCCGATTTGTTTTTAGGACCTCAGTTATATGCAGCAGTTATAAGATTCAACATTGACATGAAGGAATTCCCTATTCTGTCAAGATTATATGAGGCATATAATGAGATTCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAGCCAGATGCAGTACACTGA 648 0.412 MATGENNLKLYSHWMSSCSFRVRFALNLKGLKYEYEACNLQRISDPEFQKLNPVGYVPVLVDGDVVIVDSFAIIMYLEDKYPHHPLLPHDIHKRAINFQVANIVSSAIQPFQNLTVAKYIEEKVGPDEKLPWTQSVMGKGFTALEKLLKDHARRYATGDEIFLADLFLGPQLYAAVIRFNIDMKEFPILSRLYEAYNEIPAFREALPENQPDAVH. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00061 215 FunFam Zeta class glutathione transferase GSTZ1 6 87 - -
Seca12g00061 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
Seca12g00061 215 NCBIfam maleylacetoacetate isomerase 9 213 IPR005955 GO:0003824|GO:0005737|GO:0009072
Seca12g00061 215 FunFam Maleylacetoacetate isomerase 89 215 - -
Seca12g00061 215 Pfam Glutathione S-transferase, C-terminal domain 128 203 IPR004046 -
Seca12g00061 215 SUPERFAMILY Thioredoxin-like 6 88 IPR036249 -
Seca12g00061 215 PANTHER MALEYLACETOACETATE ISOMERASE 8 213 - -
Seca12g00061 215 SFLD Glutathione Transferase (cytosolic) 8 197 IPR040079 -
Seca12g00061 215 Pfam Glutathione S-transferase, N-terminal domain 11 83 IPR004045 -
Seca12g00061 215 SFLD Main (cytGST) 8 197 - -
Seca12g00061 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Seca12g00061 215 SUPERFAMILY GST C-terminal domain-like 85 213 IPR036282 -
Seca12g00061 215 Gene3D Glutaredoxin 5 90 - -
Seca12g00061 215 Gene3D - 91 215 - -
Seca12g00061 215 CDD GST_C_Zeta 92 210 IPR034330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00061 Seca-Chr12 686150 690770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00061 5 213 Glutathione S-transferase Gene Family AT2G02380 60.190 9.93e-92 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00061 K01800 - gmx:100526991 312.768