LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g00016	ATGATGCGAGAGAAAGACAATAGGAATAAGGAGGGAGATGGTGAAAATAACTTGAATTCCAGTAATGAAGATAATGTATGTTCTGATGATGTTGTTCCTGATGTGTTGAAAAGGATTTCTGAGTTAAGTGATGGTGATATTAGATCGCTTGAATTTGATTGTGAACGGGATGCATATGAATTCTATAGTGAATATGCGAAATTTAAAGGATTTGCTGTTAGGAAAGATGACGTTTATTGTGATCGGAATAAGCGTATTAAAATGAGACAATTGGTATGTAATAGGCAAGGGGAGAGGAGTGAGAAGCATTTAAATAGAACAAATAGAATTAAAGAAACTAAGACCATTACTCGTACCAATTGCCTTGCGAGGATTCGCTTGTTCCTAGATAGTAAAAATAGTAAGTGGAGGGTTGGAATGTTTGAGTCAGAACACAATCATGAGCTAACTCCTGCAAATATGGTACATTTGATGCCTGCTTATCGTGGATTGAGTGTTGCTGATAAGGCACAAGTAAACAGTCTTCACTTATACGGTATAAGGACATGTCATATAATGGGGCTAATAATGGGTCAGAAGGGTGGTCATTCAGACCTGGGATTTTGTAAGAAGGACTTCTACAATCACATTGGCAAGGAGAATAGGGCCAAAATAGAGGATGTAGATGTTTTTGCTGCTTTGTGCTATCTTCAAGCCAAGTATGATAGTAATCCAATGACATTTGTTAAGTTCACTACCACTGAAGATGATAGACTTGAAAACTTGTTATGGGCTGATGTAGGCAGTAGAATTGATTATCTATACTTTGGGGATGTAGTTGCTTTTGACACAACTTATAAAAAAAAAGTATAA	852	0.365	MMREKDNRNKEGDGENNLNSSNEDNVCSDDVVPDVLKRISELSDGDIRSLEFDCERDAYEFYSEYAKFKGFAVRKDDVYCDRNKRIKMRQLVCNRQGERSEKHLNRTNRIKETKTITRTNCLARIRLFLDSKNSKWRVGMFESEHNHELTPANMVHLMPAYRGLSVADKAQVNSLHLYGIRTCHIMGLIMGQKGGHSDLGFCKKDFYNHIGKENRAKIEDVDVFAALCYLQAKYDSNPMTFVKFTTTEDDRLENLLWADVGSRIDYLYFGDVVAFDTTYKKKV.	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca12g00016	283	Pfam	FAR1 DNA-binding domain	60	150	IPR004330	-
	Seca12g00016	283	MobiDBLite	consensus disorder prediction	1	27	-	-
	Seca12g00016	283	PANTHER	OS01G0519700 PROTEIN	50	275	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g00016	Seca-Chr12	262117	262968	Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca12g00016		FAR1	1.2e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g00016	-		-	ccaj:109792835	285.419