Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g07139 ATGAGAGCGCATGACAGGGCTTCTGCCAGTGAGTATTGTTGCTGTTATTCAGGTTATGAGTGGGATATTGGACATTTTCATAGGGCTCAGAAACCTAATGTGGACTGCTTTAGGAGTACTTCATTTGGACTGTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAGCAAACATATTGATGTATTGCACCGGGGGTATTCGATGTGATGTGTATTCTACAATACTGAGGCAGCAGGGATTTCAGAATTTGTATACCCTCAAGGGAGGTGTTTCTCACTATTTAAAGAATGAAGGTCCTGCAGAATGGGTAGGAAACTTATTTGTATTTGACTCCCGTCTGTCTCTCCCTCCTTCTGTTTACTATCCTGGGGACACAACTGAAGCAGAGACTACTCCAGTTTCTGGAGATGATAGGTTTGCAAAATGCTACATATGTAATTCGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGACTGTAATTTTCTTTTTCTATGCTGTAGAAAATGTGTAAAGGATCTAAGAGGATGTTGTTGTTTGACTTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGATATCAGAGATACAAAAAGTGGCACATCTATCGTGATATGGATTTGCACGGCAATATGAGAACTTCAAATTGA 681 0.4009 MRAHDRASASEYCCCYSGYEWDIGHFHRAQKPNVDCFRSTSFGLSQEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSVYYPGDTTEAETTPVSGDDRFAKCYICNSEVSELRHRNCANLDCNFLFLCCRKCVKDLRGCCCLTCTTAPRLRPVLNGYQRYKKWHIYRDMDLHGNMRTSN. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g07139 226 Pfam Rhodanase C-terminal 111 192 IPR022111 -
Seca11g07139 226 Gene3D - 16 131 IPR036873 -
Seca11g07139 226 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 18 212 IPR020936 -
Seca11g07139 226 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 18 122 IPR036873 -
Seca11g07139 226 ProSiteProfiles Rhodanese domain profile. 19 109 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g07139 Seca-Chr11 171418326 171422414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g07139 17 217 Sulfurtransferasese or Rhodanese AT1G17850 69.668 2.08e-104 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g07139 - - gmx:100814358 399.823