Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g07130 ATGGCCAAGAGATCAGATTTTGCTCAGAAGTTGCTCGATGATCTACGGCTAAGGAAAGAACGAATGGCTTCATCTCAGAGGTCAAACCAATCCCACTCCCACCATTTGCCTATAGATGCATTCGCTTACACCAAGCAAACATACAGAGGATCCAGAAATACAAAAGTTACTGAAATTGTTAGTTCCAGAACCGGGGGGGAGATGCTGAATAGGAGGCACAGATCAGTAAACAATGGAGACTTGTCAAATCAGATTATTCCATATCAGAGCTCGGGTAATGTGTCCCAAGCCCTGGCTTTTGCTTTTGAGAATGGGGGGAAACTAAGAAGGGCTGATTTTTCTTATCCTAATTCAATTATGGGTTTCCTTCACCAAATTAAAAGGGGAACAAATTTGGATAGGCAACTAGCTTCAACTAGCCACTATCCTACTCTCTCTCTCGTGCAAATAAATGAGATATCCAAAGGTGCACAGAAACTAAACCACATATTGAGAGCCTGCTCCAATGGTCTTAACATGGATACATCTTCATTACAATTCGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAGAAAAATTCAGAGTTTGTGATTACCTCTCAGGCTCAGAACAAAAACCGAATCAGACTATTAGATGAGGAGGAGGAGGATGATGATGACAGAAAGATGGAAATTTCTGAGCAAATGCAATTGGCACGACCAAATTTCTCCTTTGACAAGCCCCCAAGGCACATCCAAGAAGTTGGAAAGGCTATTTCCATACAGAGGCCAATGACTAAGGAAGCCAGAAACTCAAATAATGAAAAGAAAAGTGTGAAGAAACAAGTTTCTCAAAAGCGATCAACTAGCTCTAGCTCTGACATTTCAGAACGGCAAAACCAGACAACCTCCAACCAAGAGAAAGGCAGGATTCCAAATGTAATAGCCAAATTAATGGGGCTGGACAACCTGCCTGAGAAAGTTGAAATAGGAGGAAATCAAGGAATGGCATCCAAGCATACTGCAAAAGGAAGTACTAAGAAGAATGAATTGAAAAACAAACAAACAGTCAATTTGATACCTATGGCTACTAAAAACCAAAAAATGGTAGGAGTAGGAGCCTTGAAAATGCCAGAAAGTCAGAATGAGGAGCTGATGTTTGGTGCGCTCCTCCAAAAGGCCAGCTATGAGGTGGTTGTTCAGAATCAGAATGGAAAACCACTATGGAGGGACCCTGATGGAATAAAAGCATTAACAAGTTTTGACAAGGCCAGCACCAAAATGGACAGGCATAACACAAATTCTGCTCAAAAGAACCTTATTAGAGAGAGTCAAAATGATGTTCAGGTGATAGGAAGAAAACAAGACCACCCAAATTACAGTAGCAGAGAACAGAAAGGCACAGTGAAGGTCAGAACCAATGATCCACTTGTAAATAATATGTTGGCCCAGCTGGAACAAGTGCATGAAAGATCAGAACTTAAATCTTCGATTCAGGTTGAAAAAGAAATCAAAGGAAGTATTATTCAACCGGAAAAGAAACACACAAACAAGCACATGTTGAACAAGGAAAAGAATCCTCGAAACCATTTTGGAGTTCAAAAGCCATACATACTCTCCAAAAATGGGCCTCAAGAAGAAAAGCATCATAGAGAACAGCAGCTCCAGCTGAGGGAAGAACAAATGTTGATGATGAGACCACAAGGAGGGTGTGATATGACATCCAAGAAGTCATCAAAACACCCTCATCAATTGATCAACCCTCAGAAGAAGCTAAACCAAGCCACAGTGTTGAAGAAAAACTTGGGAGAAAATGTTGCATCTATGAAATTGGAAAGTAGCCACTATGATGATCATGATCTAGTTAAAGATGACACATCCAATGATACAAATGAAAAAGTAGGAGAAATTATGAATAGCAAGTCAGGCCAAATTTCCTCTCCAAGAGATCAAGGAGTTGAACGAGCTAAAGGAAGGCATGGCGTCAAAACACTAAAGGATGAAAAACACGTTCATAAACTGGCCAGAAAGAAAATAATGAATAGCAGAAAGCAAAGAGTTGACATGCCTGGAAGAAATGGAGCAAAGCTCATCAGTGATAAAGGAAAACAACAGATTCCCAGTTTGCAAGAAGCGAGAGATAGAGCACCTGACAAAGTAAAAGTCTTGCATGGAGCTGAGCAAGAAAGGGTTAACATGTTCAGAGAAGCCGATACATGCATCATTAGCTCCAATGAACCAATAGCTGCAACAGTGGAATTGGATGTAAAGAGCCAACCACGTAAGGAAGCTGAGCTGCCTCCTACATTACACAGTAGTTCTGGTGGCGGAGAACTTCAAAGCCAACAAGAATATCATTACCAAGATGTGCAATCGGTAGCAATCAATTTGCAAGATCAATCTGTTCCTGTGGCAGTAAATGAAGGATTCAAGACTGGTGAAATTGCATTACGTAAAACAAATGGTGAGTTTAATTTTGGTTCTAGATTCAATTTTTATTTCTAA 2517 0.4052 MAKRSDFAQKLLDDLRLRKERMASSQRSNQSHSHHLPIDAFAYTKQTYRGSRNTKVTEIVSSRTGGEMLNRRHRSVNNGDLSNQIIPYQSSGNVSQALAFAFENGGKLRRADFSYPNSIMGFLHQIKRGTNLDRQLASTSHYPTLSLVQINEISKGAQKLNHILRACSNGLNMDTSSLQFAKELLQGAIDLEESLRMLVDLQKNSEFVITSQAQNKNRIRLLDEEEEDDDDRKMEISEQMQLARPNFSFDKPPRHIQEVGKAISIQRPMTKEARNSNNEKKSVKKQVSQKRSTSSSSDISERQNQTTSNQEKGRIPNVIAKLMGLDNLPEKVEIGGNQGMASKHTAKGSTKKNELKNKQTVNLIPMATKNQKMVGVGALKMPESQNEELMFGALLQKASYEVVVQNQNGKPLWRDPDGIKALTSFDKASTKMDRHNTNSAQKNLIRESQNDVQVIGRKQDHPNYSSREQKGTVKVRTNDPLVNNMLAQLEQVHERSELKSSIQVEKEIKGSIIQPEKKHTNKHMLNKEKNPRNHFGVQKPYILSKNGPQEEKHHREQQLQLREEQMLMMRPQGGCDMTSKKSSKHPHQLINPQKKLNQATVLKKNLGENVASMKLESSHYDDHDLVKDDTSNDTNEKVGEIMNSKSGQISSPRDQGVERAKGRHGVKTLKDEKHVHKLARKKIMNSRKQRVDMPGRNGAKLISDKGKQQIPSLQEARDRAPDKVKVLHGAEQERVNMFREADTCIISSNEPIAATVELDVKSQPRKEAELPPTLHSSSGGGELQSQQEYHYQDVQSVAINLQDQSVPVAVNEGFKTGEIALRKTNGEFNFGSRFNFYF. 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g07130 838 PANTHER OS01G0228800 PROTEIN-RELATED 8 808 - -
Seca11g07130 838 MobiDBLite consensus disorder prediction 288 314 - -
Seca11g07130 838 MobiDBLite consensus disorder prediction 261 315 - -
Seca11g07130 838 MobiDBLite consensus disorder prediction 334 353 - -
Seca11g07130 838 MobiDBLite consensus disorder prediction 687 721 - -
Seca11g07130 838 Pfam DUF761-associated sequence motif 310 331 IPR032795 -
Seca11g07130 838 MobiDBLite consensus disorder prediction 763 785 - -
Seca11g07130 838 MobiDBLite consensus disorder prediction 645 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g07130 Seca-Chr11 171320592 171325644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g07130 1 330 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 36.676 5.90e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g07130 - - lja:Lj0g3v0352539.1 997.267