Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g07112 ATGGAAGAGTCATTTGTTCGCGACCGCCGCCAAGTCAACCTCCGTCTCCCCCTCCCGGAGCCTCGAACCAGTTTCCCTCTCCCTCTCCCCTTGCCCTTGCCCTTGCCTCCACCCCCTGCAGCCTCCGCCGCCCTCGGCCCCAACGACATCGAAAAGCTTCACGTTCTTGGCCACGGCAACGGCGGCACCGTCTACAAAGTTCGCCACAAGCGCACCTCTGCTGTGTACGCTCTCAAGATCATCCACGCAGACTCCGACCCGGTCACCCGAAGCCAGATCCGACGAGAAATGGACATCCTCCAGCGAACCGACTCCCCTCACGTGGTCCAGTACCACGGCTTCTTCGAGATACCCTCCGGCGATGTGGCGATCGTGATGGAGTACATGGATTTGGGGACTCTGGAAACGATGCTGAAGAAGAAGGGGACGTTCTCGGAAACGCAGCTGGCAGGGGTGGCGCGTCAGGTGCTGAGCGGTCTGAGGTACCTCCACTCGCACAAGATCATACACAGGGACATCAAGCCGTCGAACCTTCTAGTAAACGGGAAGATGGAGGTGAAGATTGGGGACTTTGGTGTGAGCAAGGTGATGTGCAGGACTGTGGATGGGTGCAATTCATATGTAGGAACCTGCGCCTACATGAGCCCGGAGCGGTTCAACCCGGATTCGAATGGCGGGAACTATAACGGGTATGCGGGGGATATTTGGAGCTTGGGTTTGACCCTATTTGAGCTCTATGTGGGTCACTTCCCCTTCCTTCGGGTGGGCCAGAGAGCCGACTGGGCCACCCTTATGTGCGCCATTTGTTTCGGGGATCCCCCCACCTTGCCACCAGAGGCTGCGTCGGCAGAGTTTCGGAGTTTCATTGGGTGTTGCTTGAATAAGGACTCCACTCAGCGCTGGACAGCATCTCAGCTCTTGACCCACCCTTTCCTCACTACTCACTAG 948 0.5791 MEESFVRDRRQVNLRLPLPEPRTSFPLPLPLPLPLPPPPAASAALGPNDIEKLHVLGHGNGGTVYKVRHKRTSAVYALKIIHADSDPVTRSQIRREMDILQRTDSPHVVQYHGFFEIPSGDVAIVMEYMDLGTLETMLKKKGTFSETQLAGVARQVLSGLRYLHSHKIIHRDIKPSNLLVNGKMEVKIGDFGVSKVMCRTVDGCNSYVGTCAYMSPERFNPDSNGGNYNGYAGDIWSLGLTLFELYVGHFPFLRVGQRADWATLMCAICFGDPPTLPPEAASAEFRSFIGCCLNKDSTQRWTASQLLTHPFLTTH. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g07112 315 ProSiteProfiles Protein kinase domain profile. 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g07112 315 FunFam Mitogen-activated protein kinase 2 131 315 - -
Seca11g07112 315 SUPERFAMILY Protein kinase-like (PK-like) 48 313 IPR011009 -
Seca11g07112 315 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Seca11g07112 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Seca11g07112 315 CDD PKc_MAPKK_plant_like 48 313 - -
Seca11g07112 315 Gene3D Transferase(Phosphotransferase) domain 1 132 315 - -
Seca11g07112 315 Gene3D Phosphorylase Kinase; domain 1 39 130 - -
Seca11g07112 315 SMART serkin_6 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g07112 315 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 46 313 - -
Seca11g07112 315 Pfam Protein kinase domain 51 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g07112 Seca-Chr11 171206744 171207691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g07112 4 312 MAP Kinase Kinase Gene Family AT1G73500 60.000 2.36e-129 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Seca11g07112 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g07112 K20604 - qsu:112003150 468.003