Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g07111 ATGCCGCGTCATTGCAAGCATTTGTTCATAGTATTATCCCTACTTTCTTCGGCTGTAGGAAGCCAAGCAACCATAACAGCCTGCTTCTCCATCATTAACCAGTGCCTGGCATTAAATTGCTTCCCCAGAGTAAAAGTTATTCACACATCAAAAACGATACACGGACAGATTTACATCCCTGATGTCAACTGGTTATTGATGATTTTCAGTCTCACTGTCACAGTTAGTTTCAGAGACCTTGTGAAGATTGGCAATGCAACAGGTTTGGCTATAATTTGTGGAATGCTAGTGACAACTAGTCTGATGTCACTAATCATTGCTCTGTATTGGGAGAAGAATTTGATTGTATCTGCGTGCTTTCTTGTATTTTTTGGCTTTCTTGAGGCTGCATATCTTTCAGCATGTTTGCTACAATTTCACAAGGGAGCTTGGTATCTAATTGTCCTTTTGGCAGTGTCCATGACAATCATGCTTTCATGGCATTATGGAACTATGAAGAAGTATGAGTTTGATTTGCAAAACAAGGTGTCAACTGAATGGCTAATAGATATTAGTCCAGGCCTTGGAATTTCCAGGGTACCTGGAATTGGCTTCATTTACACTGACATAGTTGCAGGAATCCCAGCTTTCTTCTCGCATTTTATTACTAATCTTCCTGCATTTCATCAAGTGTTGATCTTGGTGTCCTTCAAGTCTATACCGGTGCCTTATGTCCCAGAAAGTGAAAGGTATCTCATAGGTAGGATTGGACCAAGAGATTATAAAATTTATCGTTGCATTGTCAGATGTGGATATTGTGATCATATCAGGGATACGGGTGATTTTGAGGAGCAGATTATCCGTTCTATAGGAGAATTCATTTCCATTGAACAGAGTGACATTGAATCCATGGTTTCCCCAGATGAAAGAATGATAGTTGTTGGAAATTCAGCACCAGATGGAAATGCTTTAGTTCCTCTGGATGAAATTGACTCGTGCATGGGGACAAAGCTGGTGAACAATGAATCTCAGATTAGCCCACTTCGTGGTGATACACTGGGGAGTAGTAGTCGTGCTTGCAAGAAAAAAAAGGTTCGGTTCATGTTGCCTGCTAATAGTCCTAAAATGCAGCAATCTGTCAGGAAGGAGCTCTTAGAATTAATTGATGCCAGGGAGAGTGGTAGTGCCTATTTCTTGGGCCAGTCATATTTAGTGGTCCGTGATGGTTCAAACTTTCTCAAGAGATTCTTTATCATGGCCTATCGTTTCAGTGAAAAAAATTGTCGAGAACCTCCAGTGGCTCTAAAAATCCCTCATGCTGCTCTTGTAGAAGTTGGCATGGTATGTAGTATATAA 1335 0.4067 MPRHCKHLFIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTIHGQIYIPDVNWLLMIFSLTVTVSFRDLVKIGNATGLAIICGMLVTTSLMSLIIALYWEKNLIVSACFLVFFGFLEAAYLSACLLQFHKGAWYLIVLLAVSMTIMLSWHYGTMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYVPESERYLIGRIGPRDYKIYRCIVRCGYCDHIRDTGDFEEQIIRSIGEFISIEQSDIESMVSPDERMIVVGNSAPDGNALVPLDEIDSCMGTKLVNNESQISPLRGDTLGSSSRACKKKKVRFMLPANSPKMQQSVRKELLELIDARESGSAYFLGQSYLVVRDGSNFLKRFFIMAYRFSEKNCREPPVALKIPHAALVEVGMVCSI. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g07111 444 Pfam K+ potassium transporter 2 266 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g07111 444 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 442 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g07111 444 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g07111 Seca-Chr11 171201612 171206458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g07111 11 441 Inorganic Solute Cotransporters AT3G02050 47.727 2.28e-138 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g07111 K03549 K12236 gmx:100801073 791.571