Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g07095 ATGGAAGACCTCATCGGCCTTCTAAGGATTCACATCAAGCGAGGCGTCAACCTCGCCGTTCGTGATGTCAGCACTAGTGATCCATACGTCGTCGTTAAGATGGGCCATCAGAAACTGAAGACTCGTGTGATAAAAAAGGACATCAATCCTGAGTGGAATGAAGAGCTTACACTTTCTGTTACACATCCTGTTGTTCCATTCTTATTGACGGTGTATGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGACCTATCACCGTATATAGAAGCCTTAAAGATGAACTTAGAGGACCTGCCAAGTGGTACCATAATCACAAGAATACACCCTTGCAGACAAAACTGCTTGGCAGAGGATAGCTGCATCACTTATGATGATGGCAAAATTGTCCAAAATGTTGTCCTTAGATTGCGACACGTGGAGTGTGGTGAAGTGGAATTGCAATTGCAATGGATTGATCTTCCTGGTTCCAAGGGTTTATCTTAA 501 0.4311 MEDLIGLLRIHIKRGVNLAVRDVSTSDPYVVVKMGHQKLKTRVIKKDINPEWNEELTLSVTHPVVPFLLTVYDHDTFSKDDKMGDAEFDLSPYIEALKMNLEDLPSGTIITRIHPCRQNCLAEDSCITYDDGKIVQNVVLRLRHVECGEVELQLQWIDLPGSKGLS. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g07095 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 91 IPR035892 -
Seca11g07095 166 SMART C2_3c 7 102 IPR000008 -
Seca11g07095 166 CDD C2_ArfGAP 5 148 - -
Seca11g07095 166 Gene3D C2 domain 2 164 IPR035892 -
Seca11g07095 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
Seca11g07095 166 Pfam C2 domain 6 92 IPR000008 -
Seca11g07095 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g07095 Seca-Chr11 171059710 171061307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g07095 38 166 C2H2 Transcription Factor Family AT1G70790 58.779 1.08e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g07095 - - gmx:100799469 290.041