Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g07073 ATGTCTTGCTCTTCGCCTTTAGCCAATTCAAAGATTTCTTCTGCAAATTCATCGACTGGTTCACCTCTAATAATTTCCAGTTTAAGGTGGTTTGGAGAACGTTCTTCATGTAGCTATGCCAAAGGCAAGAGCCATCAGTGGCCAGTTAAGCATGGCTTTGGCCTAGTTAAAGGGAAAGTAAACCACCCAATGGAGGACTATCATGTAACAAAAATTATTCAAATTGGAGCAGATCGTGTTTCTGTGGTTGGAGAACGTTCTTCATGTAGCTATGGCAAAGGCAAAAGCGATCAGTGGCAAGTTAAGCATGGCTTTGGCCTAGTTAAAGGGAAAGTAAACCACCCAATGGAGGACTATCATGTAGCAAAATTTATTCAATGTGGAGCAGCAATGGCAAAGGCAAGAGCCATCAATGGCCACTATGGCAAAGGCAAGAGCCATCAGATGCCAATTAAGCATGGCTTTGGCCTAGTTAAAGGGAAAGTGGTTGGAGAACGTTCTTCATGTAGCTATGGCAAAGGCAAGAACGATCAGTGGCCAGTTAAGCATGGCTTTGGCCTAGTTAAAGGAAAAATAAACCACCCAATGAAGGACTATCATGTAGCAAATATTATTCAATGTGGAGCAGAACGTTCTTCATGTAGCTATGGCAATGCCAAGAGCCATCAGTGGCCAGTTAAGCATGGCTTTGGCCTAGTTAAAGGGAAATTTTGGGTGGTTGGAGAACATTCTTCATGTAGTTATTGCAAAGGCAAGAGTCATCAGTGGCCAGTTAAGAATGGTGTTGGCCTAGTTAAAGGGAAAGTAAACCACCCAATGGAGGACTATCATGTAGAAAAAATTATTCAAATTCAAAGCAGCTATGGCAAAGGCAAGAGCCATCAGGTGCCAATTAAGCATGGCTTTGGCCTAGTTAAAGGGAAAGTGGTTGGAGAACGTTCTTCATGTAGCTATGGCAAAGGCAAGAACGATCAGTGGCCAGTTAAGCATGGCTTTGGCCTAGTTAAAGGGAAAATAAACCACCCAATGGAGGACTATCATGTAGCAAATATTATTCAATGTGGAGCGGAACGTTCTTCATGTAGCTATGGCAATGCCAAGAGCCATCAGTGGCCAGTTAAGCATGGCTTTGGCCTAGTTAAAGGGAAAGTAAACCACCCAGTGCAGGACTATCATGTAGCAAAAATTATTCAATTCGGAACAGGGTGGTTGGAGAACGTTCTTCATGTAGCTATTGCAAAGGCAAGAGTCATCAGTGGCCAGTTAAGAATGGTGGTTGGAGAACGTTCTTCGTGTAGCTATGGCAATGGCAAGAGTCATCAGTGGCCAGTACTTAAGCATGGCTTTGGCCTAGTTAAAGGGAAAGTAAACCACCCAGTGGAAGACTATCATTTTTGGGTGGTTGTAGAACGTTCTTCATGTAGCTATGGCAAAGGCAGGAGTCGGAGTCATCAGTGGCTAGTTAAGAATGGCGTTGGCCTAGTTAAAGGGAAAGTAAATCACCCAATGGAGGACTATCATGTAGAAAAAAATTTCAATTCAAAGCAGGTGGTTACTGAATGTTCTTCATGTAGCTATGGCAAAGGCAAGAACCATCAGTGGCCAGTTAAGAATGGTGTTGGCCTAGTTAAAGGGAAAGTAAAAGCACCCAATGGAGGACTATCATGTAGAAAAAAATATTCAATTCAGAGCAGGTGGTTGGGGAACGTTCTTCATGTAGCTATGGCAATGGCAAGAGCCATCAGTGGCCAGTACTTAAGCATGGCTTTGGCCTAG 1776 0.4336 MSCSSPLANSKISSANSSTGSPLIISSLRWFGERSSCSYAKGKSHQWPVKHGFGLVKGKVNHPMEDYHVTKIIQIGADRVSVVGERSSCSYGKGKSDQWQVKHGFGLVKGKVNHPMEDYHVAKFIQCGAAMAKARAINGHYGKGKSHQMPIKHGFGLVKGKVVGERSSCSYGKGKNDQWPVKHGFGLVKGKINHPMKDYHVANIIQCGAERSSCSYGNAKSHQWPVKHGFGLVKGKFWVVGEHSSCSYCKGKSHQWPVKNGVGLVKGKVNHPMEDYHVEKIIQIQSSYGKGKSHQVPIKHGFGLVKGKVVGERSSCSYGKGKNDQWPVKHGFGLVKGKINHPMEDYHVANIIQCGAERSSCSYGNAKSHQWPVKHGFGLVKGKVNHPVQDYHVAKIIQFGTGWLENVLHVAIAKARVISGQLRMVVGERSSCSYGNGKSHQWPVLKHGFGLVKGKVNHPVEDYHFWVVVERSSCSYGKGRSRSHQWLVKNGVGLVKGKVNHPMEDYHVEKNFNSKQVVTECSSCSYGKGKNHQWPVKNGVGLVKGKVKAPNGGLSCRKKYSIQSRWLGNVLHVAMAMARAISGQYLSMALA. 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g07073 591 Pfam WhiA LAGLIDADG-like domain 491 519 IPR039518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g07073 Seca-Chr11 170866879 170875295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g07073 34 86 PP2C-type Phosphatase Gene Family AT1G34750 43.333 5.85e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g07073 K17506 - csav:115724962 78.1814