Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g07023 ATGTCTCCTTCTCCAACAAAACATGACGTGTTCCTTAGCTTCCGCGTGGAAGACACGCGCAACGGTTTCACTGATCATCTCTATGCAGCCTTATGCCGTGAAAAGATTAAGACTTTTATGGATGACAGACTTGGTAGCAGAGGGGAAGAGATTTCACCATTGCTTCACAAAGCAATAGAGGAATCAAATATTTATGTCATCATTTTCTCCGAACACTATGCTTCTTCCACGTGGTGTTTGGATGAACTCACCAAGATACTTGAATGCAACAAGAGATGTAAAAGGGATGTGATACCAGTTTTCTATAAGGTGGATCCATCAAATGTTAAGAATCAAAGAGAGAGTTATGGAGATGCATTTGTTAAGCATGAGCAACAACTCAAGGACAGAGTGAAGGGATGGAAAGATGCTCTGACCCAAGCAGCTGGATTACCAGGCTGGGGTTCAAGAAGAATCAGACCTGAATACCTACTTGTTCAAGAGATTGTTCAAGATATTTTGAGAAAATTGATGAACCGTTCTTCCACAATTGATGATCAAGGAATGATTGGAATTGAAAAACACATTGCACAAATCAAGTCCTTGTTGCATGTTGAGTCAGCAGCTGTTCGGATCATAGGAATTTGGGGCATTGGGGGAATAGGCAAGACAACAATTGCAGGTGCAATATATCATGAAGTGGCAAACCAATTCAGTTCCAGCAGCTTTGTTGCCAATGTTCATGAGGAAATAGAAAGATATGGATTGGACCATATGCAGAGCAGATATTTATCAGAGTCAAGTTTTTCAGATGAAAAGCTAAAACAGACAAAGGTTCTTCTTATTCTTGATAATGCCAACCATTCAAGTGAGATTAAAGATTTAATTGGAGGGCATGGTAGCCTTGGCCCAGGAAGTAGAATCATTGTGACTAGTAGAGACATGCAAGTTCTAAAGGATGCTGAAGTAGATGAACTATATGAGGTTAAGGAGATGAGTTTTCAAGATTCTCTACAGCTTTTCAGTTTGAATGCTTTCAAGCAAAACTATCCAATAGAAAATTTTATGAGCTTGTCAGAAAAGGTATTGAATTATGCTAAAGGGAGTCCATTAGCTCTCAAAGTTTTGGGCTCAATGCTTTATGGAAAAACAAAGGAAGAATGGGAAAGTGTATTGGAAAAGCTTGAAAATGTTCCTGATCTTGACACTTTTAGTGTGTTAAAATTGAGTTATGATGGACTTGATGATGAAAAGAAGGACATGTTTCTTAACATAGCATGTTTCTATGGAGGACATGATATGAATACTGTAATACAAGCACTGGATAGCTGTGGTTTCTCTGCTGCCATTGGATTGAGCCATCTTATTGATAGGGGCCTTGTATCTACTTTGAAAGGTGAAGTTGTGATGCATGATCTAATATGGGAAATGGGTCAAGAAATTGTTCATCAACAATGTGTCAGTGATCCTGGAAAACGTAGTCGATTATGGAAGCATGAGGACATCTATCATGTATTAAGAGAAAACAAGGGGACGGATGCAATCCAAGGTATATTCCTTGACATGTGCCAAATCAAAGAAGTTCAACTACATGCAGGAACTTTTAAAATGATGCATAATCTGAGAATTCTCCAGTTCTATAAGTCCAAATCAACTGAAAAATCAAAAGTGCATATTCCTTCATTTCTTGAAAGTCTTCCGGATGCTTTACAATTTCTCTGTTGGGATGGCTTCCCTCAAAGATCACTGCCTCTGGACTTTCTCCCTGCAAATCTTGTTAAACTTGATATGCATAACAGTCAACTTGAACAACTTTGGGAGAGAGATCAGCATTTGCCCAATTTGAAAAGGCTTGATCTTAGTGGATCTAAGAGCTTGGTTCAAATACCAGACCTTTCTCAATCCCCAAATATTGAAGAAATCATTCTTAGTCATTGTGTGAGTTTGGTTCAAGTTTACTCCTCAAGTTTCCTCAAGAAGCTCAACTGTTTATGGTTAAATGGTTGCATTGAGCTTAGAAGTTTAAATCTTGCTAGCAATATCCTTTCAAAATCTTCTGGACTAATAGTCCTCTATGATTGTTGCAACCTTGAGATGTTTTCAATCAATAATATCACCATAGGGGCTCAGTTATATGGTTGTTCCCGAAGTAGATCAATTGAGAGTATATTCAGGAATAGTTTGCCTGGGGAAATATTTAGTTGTTTTAGAGATACAAGACCAAGGTCCCTATTTGAGAAATTCTCAGATACTTTTGACCCCATGGATAGTGATGACTTAGATGAAAAACAAGAGGGTAATATACACTTACTAACCTTGAAAGTATTGAGAGAAGGCTCACCCTCATTATTTCCAAGTCTTAATGAGCTTTGTTGGTTAGATCTCTCTTACTGTGAATCCCTCTGGACCCTTCCAAGTGACATTTTCAAGTTGAAATTTCTAAAAAGACTTTACCTCCTTGGTTGCTCAAATTTGGAAAAGTTCCCTGAAATTGAGGAGACCATGGAAAATTTAATGGTGCTCATCTTAGACCAAACACCAATTCAAGAACTACCTTTGTCATTGCACCATTTGATTGGGCTTGAAGAGTTGAGCTTACACATGTGCCAAAGGCTTAAGTTTATTCCACCTTCAATTGGAAGAGTCAGCAAACTCTGCATGTTAGACCTTACCTATTGTGAGTCACTTGAAACTCTTCCCAGCAGCATTTTCAAATTGAAGTTGACAAAACTTTATTTGCATGGTTGCTCAATGTTGAGGACCTTCCCAGAGATCATGGAGCCAGCAGAAAGTTTTGCACACCTTTGCTTAACAAAAACAGCAATTAAGGAAATACCTTCATCATTGGAGTATTTGGTTGGGCTTCAAACCTTGCGCCTGAACTTGTGCAAAGAGCTAGAATTTCTTCCAAACAGCATTGGTAATGTAACACTTCTCACCAAGCTTGATTTTTCAGGATGTGATAAATTATCAGAAATCCCAAGTGACATTGGCCACTTGTCATCACTCAGAGAACTGTCACTGCATGAAAGTGGTGTTGTTAACCTTCCTGATAGTATTGCTCATCTGTCAAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAGGCTTGAATTTATCCCTGAGCTTCCACCATTTCTAGAACACTTGTTGGCATTTGATTGTCCTTCTATTAGAAGGGTGTCAAGTTCAAGGTTTCAAATTTTATCAGATTCCAAAGAGGGTGTCTTCAAGTTTCATCTCACCAATAGTCAAGAACTTGATCCAAGTGCTCAAAGTAACCTTGTGACTGATGCATCACTTAGGATCACTGATGATGCATATAGGTCTGTGTTCTATTGCTTTCCAGGGAATGCAGTTCCTCTTTGGTTCCCTTATAGTTGTAAGGGGCATTTAGTGACACTGAATACAGATTCTCTAAATTGGTGCAATGGTAATAGGCTCATTGGTTTTGCTCTATGTGTCATTTTAGGACTTGAAGGCATGCATGATGAAGATAGAAGATATAGTGTTTTTAGCTACAGATTCACATTTGAATCAGATGATGGCATACACATTATTCCTAGCAATGATCAGCTAAGATACTATTTCAATTGGAAGGGTCGACAGAGATTTATTGTCCATGATCATACATTTCTCTGGAAATATTATTTGGATTCTTCAAGCATCACCCAAATGCTCTCCCATGCCCACAACTTCACTTTTGAGATATGCAAGAACAAGGCTTTGTTTGGATTGCAAGGTCACATTCACACATTGAACTACCTATTCAGTCTTCCACAAATGGCTGACGCCGAACACAGACTAAGCCTCGAACCTGAGAAACAGGGCCTTCTGAACCGCCACACCGAGAAGCACTTCACCGCCGGTGAGATCGTCCGCGACATCATAATCGGCGTCTCCGACGGTCTCACCGTCCCCTTCGCCCTCGCCGCCGGCCTATCCGGCGCCAATGCCACATCCTCTATCGTCCTAACCGCCGGCATAGCAGAAGTCGCCGCCGGCGCCATTTCCATGGGTCTCGGCGGGTATTTGGCAGCAAAAAGCGAAGCTGATCATTACAGAAGAGAATTGAAAAGGGAGCAAGAAGAAATAATCGCCGTACCAGATACTGAAGCGGCAGAGGTAGCTGAAATATTGGCTGAATATGGGATAGAAGCACACGAATATGCACCTGTGGTGAATGCTCTCAGAAAGAATCCCCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGCATAGTGCAATGACAATTGCCATTGCTTACGTATTGGGTGGGCTTGTTCCTCTTGTTCCTTACATGTTCATTCCAAGTGCAACAGAGGCAGTGTTGTTTTCAGTCGTCGTTACCTTGGTTGCATTGCTTATCTTTGGCTTTGCCAAGGGATACTTCACCGGCAATAAACCTTTAAGGAGTGCTTTGGAAACTACTCTAATTGGTGCCATTGCCTCTGCAGCTGCTTTTGGTATGGCAAAGGCTTTCCATCCATAG 4506 0.4039 MSPSPTKHDVFLSFRVEDTRNGFTDHLYAALCREKIKTFMDDRLGSRGEEISPLLHKAIEESNIYVIIFSEHYASSTWCLDELTKILECNKRCKRDVIPVFYKVDPSNVKNQRESYGDAFVKHEQQLKDRVKGWKDALTQAAGLPGWGSRRIRPEYLLVQEIVQDILRKLMNRSSTIDDQGMIGIEKHIAQIKSLLHVESAAVRIIGIWGIGGIGKTTIAGAIYHEVANQFSSSSFVANVHEEIERYGLDHMQSRYLSESSFSDEKLKQTKVLLILDNANHSSEIKDLIGGHGSLGPGSRIIVTSRDMQVLKDAEVDELYEVKEMSFQDSLQLFSLNAFKQNYPIENFMSLSEKVLNYAKGSPLALKVLGSMLYGKTKEEWESVLEKLENVPDLDTFSVLKLSYDGLDDEKKDMFLNIACFYGGHDMNTVIQALDSCGFSAAIGLSHLIDRGLVSTLKGEVVMHDLIWEMGQEIVHQQCVSDPGKRSRLWKHEDIYHVLRENKGTDAIQGIFLDMCQIKEVQLHAGTFKMMHNLRILQFYKSKSTEKSKVHIPSFLESLPDALQFLCWDGFPQRSLPLDFLPANLVKLDMHNSQLEQLWERDQHLPNLKRLDLSGSKSLVQIPDLSQSPNIEEIILSHCVSLVQVYSSSFLKKLNCLWLNGCIELRSLNLASNILSKSSGLIVLYDCCNLEMFSINNITIGAQLYGCSRSRSIESIFRNSLPGEIFSCFRDTRPRSLFEKFSDTFDPMDSDDLDEKQEGNIHLLTLKVLREGSPSLFPSLNELCWLDLSYCESLWTLPSDIFKLKFLKRLYLLGCSNLEKFPEIEETMENLMVLILDQTPIQELPLSLHHLIGLEELSLHMCQRLKFIPPSIGRVSKLCMLDLTYCESLETLPSSIFKLKLTKLYLHGCSMLRTFPEIMEPAESFAHLCLTKTAIKEIPSSLEYLVGLQTLRLNLCKELEFLPNSIGNVTLLTKLDFSGCDKLSEIPSDIGHLSSLRELSLHESGVVNLPDSIAHLSSLKSLDLSDCKRLEFIPELPPFLEHLLAFDCPSIRRVSSSRFQILSDSKEGVFKFHLTNSQELDPSAQSNLVTDASLRITDDAYRSVFYCFPGNAVPLWFPYSCKGHLVTLNTDSLNWCNGNRLIGFALCVILGLEGMHDEDRRYSVFSYRFTFESDDGIHIIPSNDQLRYYFNWKGRQRFIVHDHTFLWKYYLDSSSITQMLSHAHNFTFEICKNKALFGLQGHIHTLNYLFSLPQMADAEHRLSLEPEKQGLLNRHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYRRELKREQEEIIAVPDTEAAEVAEILAEYGIEAHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYVLGGLVPLVPYMFIPSATEAVLFSVVVTLVALLIFGFAKGYFTGNKPLRSALETTLIGAIASAAAFGMAKAFHP. 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g07023 1501 FunFam Disease resistance protein (TIR-NBS-LRR class) 326 408 - -
Seca11g07023 1501 ProSiteProfiles TIR domain profile. 6 170 IPR000157 GO:0007165
Seca11g07023 1501 Gene3D - 3 172 IPR035897 -
Seca11g07023 1501 SUPERFAMILY RNI-like 563 837 - -
Seca11g07023 1501 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 172 - -
Seca11g07023 1501 Gene3D - 173 319 IPR027417 -
Seca11g07023 1501 Gene3D Ribonuclease Inhibitor 901 1060 IPR032675 -
Seca11g07023 1501 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 675 IPR044974 GO:0006952
Seca11g07023 1501 Gene3D Ribonuclease Inhibitor 760 900 IPR032675 -
Seca11g07023 1501 Pfam Leucine Rich Repeat 584 603 IPR011713 -
Seca11g07023 1501 Pfam VIT family 1286 1496 IPR008217 GO:0005384|GO:0030026
Seca11g07023 1501 SUPERFAMILY "Winged helix" DNA-binding domain 398 499 IPR036390 -
Seca11g07023 1501 CDD CCC1 1265 1499 - -
Seca11g07023 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 417 IPR027417 -
Seca11g07023 1501 SUPERFAMILY L domain-like 773 1060 - -
Seca11g07023 1501 PRINTS Disease resistance protein signature 266 280 - -
Seca11g07023 1501 PRINTS Disease resistance protein signature 359 373 - -
Seca11g07023 1501 PRINTS Disease resistance protein signature 205 220 - -
Seca11g07023 1501 PRINTS Disease resistance protein signature 603 619 - -
Seca11g07023 1501 SMART till_3 7 144 IPR000157 GO:0007165
Seca11g07023 1501 Pfam NB-ARC domain 186 390 IPR002182 GO:0043531
Seca11g07023 1501 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 147 IPR035897 -
Seca11g07023 1501 Coils Coil 1337 1357 - -
Seca11g07023 1501 Gene3D - 325 408 IPR042197 -
Seca11g07023 1501 Gene3D Ribonuclease Inhibitor 501 733 IPR032675 -
Seca11g07023 1501 Pfam C-JID domain 1108 1224 IPR045344 -
Seca11g07023 1501 ProSiteProfiles Leucine-rich repeat profile. 664 685 IPR001611 GO:0005515
Seca11g07023 1501 Pfam TIR domain 7 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g07023 Seca-Chr11 170430546 170439031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g07023 782 951 WRKY Transcription Factor Family AT4G12020 35.294 1.48e-15 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g07023 - - aip:107633930 1706.81