Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06990 ATGGTTCTGTTTCTTCTCTTCCTTCTCACAATCTCAGCCATAACAACCACATCAACCTCCTCAACCGATTCTTTCATCTTCGGTGGTTGTTCTCAGTTGAAATACTCGCCGGGTTCCGCCTACGAGAACAGTGTCAACTCGCTCCTCACCTCCCTTGTCAACTCAGCCACGTTCACCAACTACAACAACTTCACCATTCAGGCCACCCCTGCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGAGACCTCAACAACGACCAGTGCTCCCGCTGCGTGGCGCGTGCGGTGAGTCAACTCAACACTCTCTGCTTCGACTCGTACGGTGGCGCGTTGCAGCTCGAGGGATGTTTCGTGAAGTATGATAATGCCACGTTCCTTGGTGTGGAGGACAAGACGGAGGTGATCAAGAAATGTGGACCGTCGATTGGGTTGACTTCCGATGCGTTGACACGAAGGGATGATGTGCTGGCGTATTTACAGACGTCGGATGGGACTTACAAGACTTACAGGGTTAGTGGCTCAGGGGATTATTGGAGTGTGGCGCAGTGCACGGGGGATTTGAGTCCCAGCGAGTGCCAGGATTGCCTTTCTGATGCCATCCAACGGTTGAAAACAGAGTGTGGGGCCTCCACTTGGGGAGACATGTACCTGGCAAAGTGCTACGCGCGATACTCCGAAGGTGGGACTCACTCGCGAGGCAGTAATAACGGTATGATAGCAATCACAACGATGATGAGATTGAGAAGACACTTGCCATACTAA 768 0.5299 MVLFLLFLLTISAITTTSTSSTDSFIFGGCSQLKYSPGSAYENSVNSLLTSLVNSATFTNYNNFTIQATPASDTVYGLFQCRGDLNNDQCSRCVARAVSQLNTLCFDSYGGALQLEGCFVKYDNATFLGVEDKTEVIKKCGPSIGLTSDALTRRDDVLAYLQTSDGTYKTYRVSGSGDYWSVAQCTGDLSPSECQDCLSDAIQRLKTECGASTWGDMYLAKCYARYSEGGTHSRGSNNGMIAITTMMRLRRHLPY. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06990 255 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 239 - -
Seca11g06990 255 ProSiteProfiles Gnk2-homologous domain profile. 132 231 IPR002902 -
Seca11g06990 255 FunFam Cysteine-rich repeat secretory protein 60 148 229 - -
Seca11g06990 255 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
Seca11g06990 255 FunFam cysteine-rich repeat secretory protein 3 22 127 - -
Seca11g06990 255 Pfam Salt stress response/antifungal 30 124 IPR002902 -
Seca11g06990 255 Pfam Salt stress response/antifungal 167 227 IPR002902 -
Seca11g06990 255 Gene3D - 21 127 IPR038408 -
Seca11g06990 255 Gene3D - 149 229 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06990 Seca-Chr11 170132077 170135298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06990 3 227 Pollen Coat Proteome AT4G20670 24.691 1.72e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06990 - - cam:101497633 372.859