Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06984 ATGGAGAGAGATTTCATGGGTCTGAGCTCAAAAGAACCAGTCTCTGTGGTCAAGGAGGAGGTGAACGATGATGGGTGCAAAGACTCAGGCTTCACAAAGGGTTCTGCTGCACAATGGCCCTTCTCGAACAAAGTCTCTGCTGTTCCACATCTGATGTCTTTCAAGGTTTCTCAAGATGATAAGACTAAAATGTCAGTGTCTGATCCCATGACATCTGCTGGGTTTATGACTGTCTTAAGTCCAGATGCATTTGACTCTAGTCAGAAACGCTCTGCTGCTGAACCTCAGAAATCTTTCAATCACAATGGGCAAGGTGGCTTTCACTTTTCGCTGACTCCATATCCTGTACAACATGATGTGAAGATGTTTTCAGTTTCCAATCCAGCAATATCAGTTTCCCTGGGGAACCCATTCCTGAAGAATCATTTTGCAACTGCTGGTCAGAATATGAATGGTACTAATGTGACACAGCCGCTTCGTGGGGGAATACCTGTTGCAGCGCCTCATTCATCCCTTCCCACCATTGGTGCTGTTACTGGAATGACTGAATCATGCGTGAAACCTTCTGCGCCTTCTGCCCAACTTACCATCTTCTATGCTGGTACTGTCAATGTCTTTGAAGATATCTCTGCTGAGAAGGTACTCTCTTTGTTTGCACAAGCTATCATGTTGTTGGCTGGCAATTCTAACATGGCACACGCCAAAGCTCAAGCACCTGGCTCTAAGTTGGTAGCTGTTGATGGTGTGCCCGTGAGTCAACCCGCAAATACACCACCCTGCTCAGGTCTTTCAAGTCCTTTATCTGTTTCATCGCATACTGGTGCACAGTCAGGGAGTGGATCAACTAGCACTGATGAGTTTCTAGCAGCTAAAACAACTGGTGTTCCCACCACTCCTGTTAGCAATGTGGAGCCTCCAAAAGTAGTCAATGCAGCTACTATGTTGACATCAGCTGTTCCTCAAGCTCGGAAAGCATCCTTGGCTCGATTTTTAGAAAAGCGCAAGGAAAGGTTAGTTCTGGTACATTTTTCTTTTCCTTTTTTTTGGGGGTGGGGGGAGAGGAGGGATAATCTGATCTCAGCGAAAAGTAAACATAGTTATCATCCTTGGACTGTTAAAATTGGTTGA 1128 0.4548 MERDFMGLSSKEPVSVVKEEVNDDGCKDSGFTKGSAAQWPFSNKVSAVPHLMSFKVSQDDKTKMSVSDPMTSAGFMTVLSPDAFDSSQKRSAAEPQKSFNHNGQGGFHFSLTPYPVQHDVKMFSVSNPAISVSLGNPFLKNHFATAGQNMNGTNVTQPLRGGIPVAAPHSSLPTIGAVTGMTESCVKPSAPSAQLTIFYAGTVNVFEDISAEKVLSLFAQAIMLLAGNSNMAHAKAQAPGSKLVAVDGVPVSQPANTPPCSGLSSPLSVSSHTGAQSGSGSTSTDEFLAAKTTGVPTTPVSNVEPPKVVNAATMLTSAVPQARKASLARFLEKRKERLVLVHFSFPFFWGWGERRDNLISAKSKHSYHPWTVKIG. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06984 375 MobiDBLite consensus disorder prediction 255 286 - -
Seca11g06984 375 ProSiteProfiles Tify domain profile. 188 228 IPR010399 -
Seca11g06984 375 SMART tify_2 188 228 IPR010399 -
Seca11g06984 375 Pfam Jas motif 320 339 IPR018467 -
Seca11g06984 375 Pfam tify domain 190 227 IPR010399 -
Seca11g06984 375 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 102 339 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06984 Seca-Chr11 170069989 170073899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06984 39 341 Tify Gene Family AT3G17860 35.962 2.38e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Seca11g06984 tify 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06984 K13464 - gmx:100807043 459.144