Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06915 ATGCCAATCATCAAGTTTACCAAGCTCTTCATCAATGGAGATTTCGTCGATTCCGTATCAGGGAAGACATTTGAGACAATAGACCCAAGAACAGGAGAAGTGACTGCAAGTATTAGCGAGGGAGATAAAGAAGACATTGACATTGCTGTTAAGGCAGCGCGTGAGGCATTTGATTCAGGTCCATGGCCTCGCATGTCCGGTGTTGAAAGGGCAAAAATTATGATGAAATGGGCAGACTTAATTGATCAAAACAGAGAAGAACTAGCAGCATTGGAGACGATTGATTCTGGAAAGTTGTACCATTCCACTATGGTTTTGGAAATTCCTGCAGCCGCAAGTACTCTACGTTACTATGCAGGTGCTGCTGATAAAATTCATGGCGAGGTTTTAAAACCAGCACGGGAGTTTCACGCTTATACACTGTTGGAACCAATTGGTGTTGTGGGACACATAATTCCCTGGAATGCCCCAACCTCCATTTTCTTCACCAAAGTTAGCCCTTCCTTAGCTGTGGGATGCACCATGGTCCTCAAGCCTGCTGAACAAGCACCTCTCTCTGCTTTGTTTTGTGCTCATCTTGCTAAGCTGGCTGGAATCCCAAATGGAGTGCTCAATGTAGTGCCTGGATTTGGACCAACTGCTGGTGCAGCAATAAGCTCACATATGGACATAGATGCGGTCAGCTTTACTGGTTCAGTTGAAGTAGGTCGTGAAGTAATGCAAGCTGCAGCTAGGAGTAATTTAAAACCGGTTTCACTTGAATTAGGAGGCAAATCACCTCTCATTATTTTCGATGATGCTGATATAGACAAAGCTGCTGAACTTGCTCTCTTAGGCATCCTATTTAACAAGGGAGAAGCTTGTGTTGCAAGTTCCCGTGTGTTCGTTCATGAAGGGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGATCGTTGGGGATCCTTTTGATCCTAAAACTCAGCAAGGGCCACAGGTAAGGACACAATATATAATTGCACAGAACCAATTTAAAAAAATTCTTTCCTATATTGAGCATGGAAAGAGAGAAGGAGCCACCCTCTTGACTGGAGGTAAAACAGTGGGCAGTAAAGGCTACTACATTGAACCAACAATTTTCTCCGATGTAAAGGAGGATATGCTTATAGCACAGGATGAAATATTTGGCCCTGTGATGGCACTGATGAAGTTTAAGACTATTGATGAAGCAATAAAGAGTGCTAACAATACCAAATATGGCCTAGCAGCAGGCATTGTGACCAAGAACTTGGATACTGCAAACACTATGTCAAGGTCCATTCGGGCAGGCACTATTTGGATCAATTGCTATTTCGCCTTAGGGAGTGACATTCCTTTTGGAGGCTATAAGATGAGTGGATTTGGAAGAGATTTGGGATTGGAGGCCCTTCACAAGTACTTACAAATTAAATCTGTTGTAACACCTATTTATAATTCTCCTTGGCTGTGA 1482 0.4305 MPIIKFTKLFINGDFVDSVSGKTFETIDPRTGEVTASISEGDKEDIDIAVKAAREAFDSGPWPRMSGVERAKIMMKWADLIDQNREELAALETIDSGKLYHSTMVLEIPAAASTLRYYAGAADKIHGEVLKPAREFHAYTLLEPIGVVGHIIPWNAPTSIFFTKVSPSLAVGCTMVLKPAEQAPLSALFCAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDAVSFTGSVEVGREVMQAAARSNLKPVSLELGGKSPLIIFDDADIDKAAELALLGILFNKGEACVASSRVFVHEGIYDEFEKKLVEKAKAWIVGDPFDPKTQQGPQVRTQYIIAQNQFKKILSYIEHGKREGATLLTGGKTVGSKGYYIEPTIFSDVKEDMLIAQDEIFGPVMALMKFKTIDEAIKSANNTKYGLAAGIVTKNLDTANTMSRSIRAGTIWINCYFALGSDIPFGGYKMSGFGRDLGLEALHKYLQIKSVVTPIYNSPWL. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06915 493 FunFam Aldehyde dehydrogenase, putative 455 481 - -
Seca11g06915 493 FunFam Aldehyde dehydrogenase3 257 452 - -
Seca11g06915 493 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 281 292 IPR016160 GO:0016491
Seca11g06915 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 257 452 IPR016163 GO:0016620
Seca11g06915 493 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 11 276 - -
Seca11g06915 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 11 481 IPR016162 GO:0016491
Seca11g06915 493 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 483 - -
Seca11g06915 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 253 260 IPR029510 GO:0016491
Seca11g06915 493 Pfam Aldehyde dehydrogenase family 15 483 IPR015590 GO:0016491
Seca11g06915 493 SUPERFAMILY ALDH-like 3 489 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06915 Seca-Chr11 169346012 169350390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06915 1 493 Aldehyde Dehydrogenase Gene Family AT3G24503 69.028 0.0 712