Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06903 ATGGAAAACCAAAACCGTCTGAAAATGCGAATCTCTCGCATGTTCCGATCCTCTTTCGGTTCTTGCAGGACCCGAAACTTAACCGATGTTATGGAAAAAGCAGTTTTTGCACCACCCAACAACCAGAACCGTGCCGGTTTCCACCTCATTGACCCTCCTTCCCCAAAAACTAGACCCTTTCCCCCTATTTGCAGACCCAAAGGCTCAGAAACCATAAACGACCGTTGCATCGTGTCGTTTAAGGATTCTCACCCTAGACGCAAAATCTCTGAATGGTCATCATCACCCTTTCTCTTGGGTGTTACTAATTGCCCCCCTGCTTCCCCTTTGAACACAATCCATGAACATGACTTTGGTTTCTACGAGAAAAAAACAAAGGGTTCAGCCAGAAACGTGAGGAACAAGAAGAAAAAGAAGAAGAAGAAGCATGCCCAGAAGAAAACCAAGGCCAGAGACATGTTCCCTTTTAATTCTTGTGCTAAAGACACAAACTTTTATGGTTATTGGTGGTATAGCAGTGATGAAGACGATGAAACGGACACGCTTTTCTCCTCCAGGAGCCTCTCTTCTGATTCCTCCAGGTCTCGCCGCCGGCACCATTCTCGCCGGAAAAGTGACCGGAGCTCCGAGATGGGTGTTCTGCCCTTGAATGGGAAGGTGAAGGACACTTTTGCAGTGGTGAAGCGCTCGAGTGATCCTTACAATGATTTTAGGACATCGATGGTGGAGATGATAATGGAGAAGCAGATATTTTCGCCAGGGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCACTGAATTCGTATCATCATCACAAGATCATTGTTGAAGTCTTCACAGAGATTTGGGAAGCTATGTTTGCTGACTGGTTTTAA 876 0.4578 MENQNRLKMRISRMFRSSFGSCRTRNLTDVMEKAVFAPPNNQNRAGFHLIDPPSPKTRPFPPICRPKGSETINDRCIVSFKDSHPRRKISEWSSSPFLLGVTNCPPASPLNTIHEHDFGFYEKKTKGSARNVRNKKKKKKKKHAQKKTKARDMFPFNSCAKDTNFYGYWWYSSDEDDETDTLFSSRSLSSDSSRSRRRHHSRRKSDRSSEMGVLPLNGKVKDTFAVVKRSSDPYNDFRTSMVEMIMEKQIFSPGDLENLLQCFLSLNSYHHHKIIVEVFTEIWEAMFADWF. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06903 291 MobiDBLite consensus disorder prediction 182 212 - -
Seca11g06903 291 ProSiteProfiles OVATE domain profile. 226 285 IPR006458 -
Seca11g06903 291 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 116 287 IPR038933 GO:0045892
Seca11g06903 291 MobiDBLite consensus disorder prediction 129 148 - -
Seca11g06903 291 NCBIfam uncharacterized plant-specific domain TIGR01568 224 286 IPR006458 -
Seca11g06903 291 MobiDBLite consensus disorder prediction 125 151 - -
Seca11g06903 291 Pfam Transcriptional repressor, ovate 230 287 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06903 Seca-Chr11 169270624 169271499 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca11g06903 Ovate 6.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06903 - - gmx:100776613 383.259