Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06901 ATGATCATGGGGAGCACGGCCACCACCCGACGCACCTCTCTCTCCATCCTTTTCCTATCCATCGCATTCTCTCTCTATCATTTCAGTTTCAATTTCAATTTCCGACGCCAGAGTGAGCCCCGCCACAACTACATCGTGCGCTTCCTCCAATACAGGAATGCCGTGCACCACCGTGCCTATCTCGAATCGAACCTCCCATCCCAAGGCTGGCGGTGGATCGATCACCGGAATCCCGCTGCCAACTACCCCACCGATTTCGGCTTGGTTTCCGTCGAGGATTCGGTGAAAGACGGGTTGACCCGCAAAATTCGAAGCCTTGCACAGGTGAAGGACGTGCATGTGGATATAGGGTATAAGAGGGATCTTCTCCATAAATCTGGTGCCTTTATTGATGGAACAAAGAATCGCCCTGGCAAGATATTCACGCCAATGTCATTCAGCGAAACACATTGTGAGCCAATTGCCAACTCTTCCCTTCAATTGGGGAGGCAACTCTTCAGGCAGAGATCTCAAATTACTTCCATGTTTGGGGCAGAGGATCTTTGGGCGAAAGGGTACACTGGTGCAAAAGTCAAAATGGCAATATTTGATACCGGCATTAGACCTAATCACCCTCATTTCCGTAACATCAAGGAGCGTACAAATTGGACCAATGAGAACACATTGAATGATAATCTTGGACATGGGACCTTTGTTGCCGGTGTTGTTGCTGGTGTAGATGCAGAGTGTCTTGGTTTTGCACCAGATACTGAGATTTATGCTTTTCGTGTGTTCACTGATGCACAGGTTTCATACACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGCTAAATTTGAGCATAGGTGGGCCTGATTATTTGGATCTACCATTTGTTGAGAAGATATGGGAGATAACAGCAAATAACATTATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTAAAAAATCCAGCAGATCAAAGTGATGTCATTGGTGTTGGTGGTATTGACTACAGTGATCATATAGCTTCCTTTTCCTCACGCGGCATGAGTACCTGGGAGCTTCCTCATGGTTATGGTCGTGTGAAGCCAGACATAGTTGCATATGGACGGGACATAATGGGATCCAAGATCAGTACGGGTTGTAAAAGTTTATCAGGAACTAGTGTTGCAAGCCCTGTAGTTGCTGGTATTGTATGCTTGCTTGTCAGTGTCATCCCTGAATCTAATCGAAAAGATATCTTAAACCCAGCAAGTATGAAACAAGCATTGGTTGAGGGTGCTACAAAGCTTGCTGGGCCTAACATGTTTGAGCAGGGTGCTGGCAGAGTTGATCTATTAGAATCGTATGAGATTCTTAAGAGCTACAAGCCCAGGGCAAGCATCTTTCCTAGTGTCCTTGATTATACAGATTGTCCTTACTCATGGCCCTTTTGTCGTCAGCCACTCTATGCAGGTTCCATGCCTGTAATCTTTAATGCAACCATTTTGAATGGAATGAGTGTTATTGGCTATGTTGAAGGTCCACCAACATGGCATCCTTCCAGTGAAGAAGGGAATCTTTTAAGTATTCATTTTACATATTCAGAGGTCATCTGGCCTTGGACTGGTTATTTGGCACTTCACATGCAAATCAAGGAAGAAGGTGCTCAATTTTCTGGGAATATTGAAGGTAATGTGACCCTCAGGGTTTCCAGCCCTCCAGCTCAAGGAGAGAAGGGTCCTCGAATCAGTATCTGTGTGCTTCAATTGAAGTTAAAAGTGATTCCAACACCACCACGATCGAAACGAGTTTTATGGGATCAGTTTCATAGTATTAAATACCCACCTGGTTATATTCCAAGAGACTCCTTGGATGTTCGCAATGACATTCTTGACTGGCATGGTGATCATCTGCATACAAATTTTCACATCATGTTCAACATGCTACGAGATGCTGGTTACTATGTTGAAACGCTTGGTTCTCCTCTTACATGCTTTGATGCTCATCAATATGGAACACTTTTGATGGTGGATCTTGAAGACGAATACTTTGCTGAGGAGATTGAAAAACTAAGAGACGATGTTTTAGATACTGGTTTGGGACTAGCTGTCTTTGCTGAGTGGTATAATGTAGATACCATGGTCAAGATGAGATTCTTTGATGAGAATACACGGAGCTGGTGGACCCCAGTTACTGGAGGTGCAAATATTCCAGCACTAAATGATCTTTTGGCTCCATTCGGGATTGCTTTTGGAGACAAGATCCTGAATGGTGATTTTTCACTTTTAGGGGAGCAGAGTCGATATGCTTCTGGAACAGATATAGTGAGGTTTCCAAGAGGTGGTTATGTTCACAGCTTTCCTTTCTTGGATAGTTCAGAAAGTGGAGCCACTCAAAATGTGCTTCTTACTTCCGACATGACCAAGACAGATTCTCCAATTCTTGGTCTTACAGTGATGGGTGAAGGTCGCATAACTGTTTATGGGGATTCCAATTGTTTGGATAGTAGCCATATGGTTACTAATTGTTATTGGCTTCTGAAGAAAATGTTAGATTTTACCAGTCTAGATGTCAGGGATCCCGTGCTTTTCTCTTAA 2595 0.4374 MIMGSTATTRRTSLSILFLSIAFSLYHFSFNFNFRRQSEPRHNYIVRFLQYRNAVHHRAYLESNLPSQGWRWIDHRNPAANYPTDFGLVSVEDSVKDGLTRKIRSLAQVKDVHVDIGYKRDLLHKSGAFIDGTKNRPGKIFTPMSFSETHCEPIANSSLQLGRQLFRQRSQITSMFGAEDLWAKGYTGAKVKMAIFDTGIRPNHPHFRNIKERTNWTNENTLNDNLGHGTFVAGVVAGVDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLKNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISTGCKSLSGTSVASPVVAGIVCLLVSVIPESNRKDILNPASMKQALVEGATKLAGPNMFEQGAGRVDLLESYEILKSYKPRASIFPSVLDYTDCPYSWPFCRQPLYAGSMPVIFNATILNGMSVIGYVEGPPTWHPSSEEGNLLSIHFTYSEVIWPWTGYLALHMQIKEEGAQFSGNIEGNVTLRVSSPPAQGEKGPRISICVLQLKLKVIPTPPRSKRVLWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDAHQYGTLLMVDLEDEYFAEEIEKLRDDVLDTGLGLAVFAEWYNVDTMVKMRFFDENTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLLGEQSRYASGTDIVRFPRGGYVHSFPFLDSSESGATQNVLLTSDMTKTDSPILGLTVMGEGRITVYGDSNCLDSSHMVTNCYWLLKKMLDFTSLDVRDPVLFS. 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06901 864 ProSitePatterns Serine proteases, subtilase family, histidine active site. 228 238 IPR022398 -
Seca11g06901 864 FunFam subtilisin-like protease SBT6.1 160 454 - -
Seca11g06901 864 PANTHER PEPTIDASE S8 39 442 - -
Seca11g06901 864 CDD Peptidases_S8_SKI-1_like 182 438 IPR034185 -
Seca11g06901 864 Gene3D Peptidase S8/S53 domain 161 454 IPR036852 GO:0004252|GO:0006508
Seca11g06901 864 ProSitePatterns Serine proteases, subtilase family, serine active site. 392 402 IPR023828 -
Seca11g06901 864 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Seca11g06901 864 PRINTS Subtilisin serine protease family (S8) signature 188 207 IPR015500 -
Seca11g06901 864 PRINTS Subtilisin serine protease family (S8) signature 391 407 IPR015500 -
Seca11g06901 864 Pfam Subtilase family 189 440 IPR000209 GO:0006508|GO:0008236
Seca11g06901 864 SUPERFAMILY Subtilisin-like 171 451 IPR036852 GO:0004252|GO:0006508
Seca11g06901 864 ProSiteProfiles Serine proteases, subtilase domain profile. 169 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06901 Seca-Chr11 169249573 169254752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06901 262 864 Subtilisin-like Serine Gene Family AT5G19660 87.231 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06901 K08653 - gmx:100819188 1471.45