Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06893 ATGTATAAATCATTTGTGACATGTGATGATCCAAAAGGAGTTGTGCAATGTGGAACTATCAGGAAATACAGGAGGACTTATTCTCAGAAAATGAAGGACGAGATCAAAATCCAGAAGACACCTGAAAACATAGAAACATCCTTGATGAATACAAGATACAAAGAAGGCAAGATCCTAAAAGGATCCAGTGAAAACCTCACTGATCCATCATCTCTGCACCTCATACAGGTCTCTAGGGGGGACCAAAGTTTGAACAGCATGATTGATTCATGGTCTAGCAATTTTATGTATGATGGAAGGTCTAAAGATACTGCAAAAAGTTTGTTAAAAGGAGTTCTTAATATGCAAGATTCTCTAATCATGCTTAGCAAGTTGCAAGAGGCTTCACAACATACAGCTCGTTCCAAGAGAAAACACACTGAGAAACCTAAAAGAGATAAGATTGATGCAAAGATGATTGGTAGAATGCATGCCAATCAATTTAGTGAACAAAGTAATCCAAAGAGATATCAAAGAGCTCAGCCTTCTGCAGATGATGGTTCTTCAAGTAAATTAATTAAGGAGAGTTTGATTAGGCAAAATCTGTTTCCATTTCCAAACACAACTCCTATAAGCCCAAGCCAATCTTCTGGGGTTAGCACTCACAGGTTTGCTGATCCTTCTTTCTCACTAACACCTTCAAAAGGACCCAATCTAGTTGCCAAGTTGATGGGTTTAGAAGAAGTCCCCTCAAAATCATTTCCTGCTATAATGCAGAAACCTTTGGATGGTGAAAAGATTATGCTGAAGGTTAAAAGGAATAAATATAGAGCTGAGATTGAGAAGGTTAATCCAGAACAAAAGGTCCTGAGAGAAACTTCTGACACTGTGCATCTCAAAGGACAGAATTTTGTCAAAGAGCCAAAGCTTCTGGTCCATCATTTCAGTGATCCCAATTCCAAGCAGTTTGATAATTTATCTCCTATTGTACTCATGAAACCTCAATGTACTTCATGCCAAGAATCAGTAAAAACCCATATCCCAGTTCCTCCTGAAGAGTTATCCATTAGAAAACTGAGAGAGGAAATAATCTCTTCCAAAACTATCAGACAAAGAAAAGGTTCCAGTTCCAGTTCCACCAACATGGACAAAGAAATGGAAAAAGATGTGAGGAGACGGCTTACCAAAGAGAAAAGACCTGAGTTTCTCAAAGAGGTTGTGAAACTGGATGCAAAAGGAATCAATCCTATGGAAAAAACTTCTGGTAAGTTAAAACTGTATTGTCAGGTTAGTCACACATCACAGGCAAATGAGACAATTGATAAAAAATGTAAGGTACAGATCATTAGTAGAAAACTGCCAGAAAAGGATATCTCAGTGCCTAGAATTGTGGCAATACCTCAAGATCAAAGAGAAATCACCTCCACAAAATTGAGGAAGCCACCAAATTGGTCCAGAGTCGACAAAAATGAGATTTTCTTCCTAGAGAGCACAGATTCAAACACAATCTTCATCTCTAAAAAAGAGTCACAAAAAATTACTAATTCCAAGGACCTTAGTATGGAGATTAAAGAATCTGATTCTGTGCTAAATTCCTTAACACGTAGAAAGAATCAGCTGAAGAACCAAACTCCCAGTGCTGAGCCTGAAGCAGCTAAATCAATTGCTGAACAAATGGGGCTTGGAAAAGAGAAGAAAAGTATAGGTGTTCCTGGTAAGGATGATTCTGCAGAGATTAGAATCACCACAGTACAAGCAGATGAACTCATGATGAGGCGTGAAGCACTTGCCTATGAAAATAAGAATAGAGGATGTAAGAGGAGAAAGAGTTCTTCAGGAAATGACATTATGCTGCTAAAGTCTGAACATGAAAATGATTCTATCTTTGTTAAAGAAGCTCCTGATAGCATTCCTGACAAAGAGGGAGATAAGCTAAAACATTTTCTTTTAACCAGTGAATCATTTATTAGACATGCAGAGAAGCTGTTCAATCTTGATGTGGATTGTCCTAAGATCCTACAAAAAAATGAAACTAAAGGGATAGACAATCTCAGGCTTTATTTGGAATGTGCAAATGAACTTAGTGAGTGTAAAAGCCTTCAAGAGTCACAAGTAGTGCGTTCTTTGTTGCTAACTTGTGTGGGGAACTCAAGATTACTTGTCTCTTTAAGAAGGCTGGTTGAAGAAATCTATGATGCCATTGAGAATCTGAAATTTTATAGTGAGAGTTGTGGGGAGAAACCTTTCACAGACAATCTCTTTGCAATGACAGAGAGAGATATAATGTGCAATGGACTGGTAAATGGTATATGGGAGTGGGGTTGGAGACACGGATTTTCTGCAGATGAGACTGAGATGGTTGTAAATAAAGTAGAGAGCTTGCTTGTAAGTGAATTAATTGAGGACATTATTATAAATTTATGA 2403 0.3779 MYKSFVTCDDPKGVVQCGTIRKYRRTYSQKMKDEIKIQKTPENIETSLMNTRYKEGKILKGSSENLTDPSSLHLIQVSRGDQSLNSMIDSWSSNFMYDGRSKDTAKSLLKGVLNMQDSLIMLSKLQEASQHTARSKRKHTEKPKRDKIDAKMIGRMHANQFSEQSNPKRYQRAQPSADDGSSSKLIKESLIRQNLFPFPNTTPISPSQSSGVSTHRFADPSFSLTPSKGPNLVAKLMGLEEVPSKSFPAIMQKPLDGEKIMLKVKRNKYRAEIEKVNPEQKVLRETSDTVHLKGQNFVKEPKLLVHHFSDPNSKQFDNLSPIVLMKPQCTSCQESVKTHIPVPPEELSIRKLREEIISSKTIRQRKGSSSSSTNMDKEMEKDVRRRLTKEKRPEFLKEVVKLDAKGINPMEKTSGKLKLYCQVSHTSQANETIDKKCKVQIISRKLPEKDISVPRIVAIPQDQREITSTKLRKPPNWSRVDKNEIFFLESTDSNTIFISKKESQKITNSKDLSMEIKESDSVLNSLTRRKNQLKNQTPSAEPEAAKSIAEQMGLGKEKKSIGVPGKDDSAEIRITTVQADELMMRREALAYENKNRGCKRRKSSSGNDIMLLKSEHENDSIFVKEAPDSIPDKEGDKLKHFLLTSESFIRHAEKLFNLDVDCPKILQKNETKGIDNLRLYLECANELSECKSLQESQVVRSLLLTCVGNSRLLVSLRRLVEEIYDAIENLKFYSESCGEKPFTDNLFAMTERDIMCNGLVNGIWEWGWRHGFSADETEMVVNKVESLLVSELIEDIIINL. 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06893 800 MobiDBLite consensus disorder prediction 126 183 - -
Seca11g06893 800 MobiDBLite consensus disorder prediction 158 183 - -
Seca11g06893 800 PANTHER OS01G0228800 PROTEIN-RELATED 1 798 - -
Seca11g06893 800 MobiDBLite consensus disorder prediction 359 385 - -
Seca11g06893 800 Pfam DUF761-associated sequence motif 228 247 IPR032795 -
Seca11g06893 800 Coils Coil 516 536 - -
Seca11g06893 800 MobiDBLite consensus disorder prediction 197 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06893 Seca-Chr11 169192713 169196553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06893 638 797 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 30.952 1.61e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06893 - - var:108346558 760.755