Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06856 ATGCGAGGCGTGGAGGTGGCTAAATTTTGTGCCAGACGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATTGCAGGTGGCGCTGAATGGAGGAGAAGGTGGGAAGCAGTATTTGCTAATGGCTTTGAGAGGACTGACAATGAAATCTTATCAGACGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCCGTGGTGGTTCTATCTTGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTTGTTCTTTGCCGCAAGACTCAAACAATCCCCTTGACAGTGGATCAGAAGCCTGATAGACAAGATGAACTCATGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGAGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATTCCGGTGCCGGAGATAACTTTTACAGCAAGAACGGACGAGGATGAGTGCTTAATTTTGGCAAGTGATGGACTGTGGGATGTAATGACAAATGAAGAGGTTGGAGAAGTAGCGCGCCACATTCTAAGAAGGCGCCGCAGAACCTTGTCAATGGAGGAAACATCTCCAGCACAAGTTGTTGCTGATAGCCTGACTGAAATTGCATATGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCAGCCAAGGCCTCCTTAG 723 0.462 MRGVEVAKFCARRMHDVIAEEWDREIAGGAEWRRRWEAVFANGFERTDNEILSDAVAPEMVGSTASVVVLSCCQIITSNCGDSRVVLCRKTQTIPLTVDQKPDRQDELMRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNEEVGEVARHILRRRRRTLSMEETSPAQVVADSLTEIAYGRNSKDNISIIVVDLKSKRKRQPRPP. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06856 240 Gene3D - 1 238 IPR036457 -
Seca11g06856 240 PANTHER PROTEIN PHOSPHATASE 3 229 IPR015655 GO:0004722|GO:0006470
Seca11g06856 240 Pfam Protein phosphatase 2C 3 222 IPR001932 -
Seca11g06856 240 CDD PP2Cc 1 229 IPR001932 -
Seca11g06856 240 SMART PP2C_4 1 227 IPR001932 -
Seca11g06856 240 SUPERFAMILY PP2C-like 1 230 IPR036457 -
Seca11g06856 240 ProSiteProfiles PPM-type phosphatase domain profile. 1 229 IPR001932 -
Seca11g06856 240 FunFam Protein phosphatase 2C 50 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06856 Seca-Chr11 168844492 168850367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06856 3 239 PP2C-type Phosphatase Gene Family AT4G26080 50.787 5.17e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06856 K14497 - gmx:100793293 441.039