Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06819 ATGAGTAGCCAAAAGGGTCATTATGAAGAAGGGATGGGTTCTTCGGAGGTCACTGGGAAAGTGGTGGTGGTTGCAGTCAAAGCTTCCAAAGATATTTCAAGGACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTATTGGTCCTCATTCCAGCTCTCTCCTCAAGCAAGAGGGTATGGGGCCTTTCAAGATTTACTACTGATTGTACCTCTAGTCACTGGAGATCCCGTTTAGGAACTCCTTCAGATCAGAAAGAAGTTATTACAAATTCCTGTTCTCAATTAGTGCTTCAACTTCATGATTTTTATGACCCAGAGAAGATAAAGATCAGAGTAAAGATTCTTTCTGGTTCTTTATGTGGAGCTGTGGCTGCTGAAGCCAAGAGAGTCCAAGCAAGCTGGGTTATATTGGAGAAAAAATTGAAACCTGAAAAGAAGTACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGGTCTCAACCAAAGATTCTACGCTTGAATTTGAATGGTTCACCAAAGATGGAACTCAAAAGGGATTGTTCATTGTCATTGGAGCAGAATTTATATACTAGAAACTTAAAAGACAACTATGAACATCCAGATGTAATTAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCAGAACAAGGGTCACCACCATTAACTGCAACTGATATTGGAACATCATCAATATCAAGCTCAGATCCTGGGACTTCACCATTTTTCCACTCTGATAATTATGAAAGAAGAAGGAGGGGTTTTCCCTTTATTCATGAAGGACTGACAAACCTGGAGGAAATTGAATCTGACTCAGAGAGTGAAAAGCTAAGTTTATCATCCAAAAGTTCATATTTTCAGCCATGGATTGCAAATGTAATTTGTATTGATGGTGAATTCTCAAAACATGAGGACAATATGCAACAATCTAGTGATAAGGCTTTGGTTTCTACCTACGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATCAAGATCCTGTCTTAGGAGTACTTAATTGTAAAATTGATGTGAACTTAAGCAAAAGTGTTAGAGAAGCAATTTCACTAGCCAAAAGTGCTCCTCCTGGACCTCCCCCATTGTGTTCTATTTGTCAGCACAAGGCACCTGTGTTTGGGAATCCTCCAAGATGGTTTACATTTGCTGAATTGCAGCTTGCTACTGGTGGTTTTTCACAAGCAAACTTCTTGGCTGAAGGCGGTTTTGGTTCTGTACACCGTGGTGTCCTACCTGATGGGCAGGTGATTGCTGTGAAGCAGTATAAATTAGCCAGTACTCAAGGAGATAAAGAATTTTGCTCAGAAGTAGAGGTTTTAAGCTGTGCTCAACATCGTAATGTTGTGATGCTAATTGGGTTTTGTGTGGAAGATGGAAGAAGATTGCTAGTTTATGAATACCTTTGCAATGGATCTCTGGATTCTCATCTCTATGGACGAAAGCAGAATGTATTGGAATGGTCTGCACGGCAAAAAATTGCAGTTGGAGCAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGCATTGTGCACCGTGATATGAGGCCTAACAATATCCTCCTCACTCATGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGATATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCGCCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCATTTGGGATAGTATTACTGGAGCTTGTGACAGGACGAAAAGCCGTGGATATAAACCGCCCCAAGGGCCAGCAATGCCTCAGTGAATGGGCACGGCCATTGCTTGAAGAACAAGCCACTCATAAACTGGTAGATCCGAGCATAAGGAACTGCTATGTTGATCAAGAGGTTTATCGCATGCTGCAGTGTTCCTCTTTGTGCATCCAACGAGATCCTCATTTAAGGCCTAGAATGTCTCAGGTGCTCAAGATGTTGGAAGGTGACATTCTCATGTGA 2049 0.4192 MSSQKGHYEEGMGSSEVTGKVVVVAVKASKDISRTALVWALTHVVQPGDCIKLLVLIPALSSSKRVWGLSRFTTDCTSSHWRSRLGTPSDQKEVITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQASWVILEKKLKPEKKYCMEQLHCNIVIMKRSQPKILRLNLNGSPKMELKRDCSLSLEQNLYTRNLKDNYEHPDVIRGPAVTPASSPEQGSPPLTATDIGTSSISSSDPGTSPFFHSDNYERRRRGFPFIHEGLTNLEEIESDSESEKLSLSSKSSYFQPWIANVICIDGEFSKHEDNMQQSSDKALVSTYEALLQKFSKLDQDPVLGVLNCKIDVNLSKSVREAISLAKSAPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYLCNGSLDSHLYGRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEEQATHKLVDPSIRNCYVDQEVYRMLQCSSLCIQRDPHLRPRMSQVLKMLEGDILM. 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06819 682 PANTHER OS01G0750732 PROTEIN 164 680 - -
Seca11g06819 682 CDD STKc_IRAK 412 678 - -
Seca11g06819 682 MobiDBLite consensus disorder prediction 221 251 - -
Seca11g06819 682 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Seca11g06819 682 MobiDBLite consensus disorder prediction 210 254 - -
Seca11g06819 682 SUPERFAMILY Protein kinase-like (PK-like) 386 677 IPR011009 -
Seca11g06819 682 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 482 682 - -
Seca11g06819 682 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 378 481 - -
Seca11g06819 682 Gene3D Transferase(Phosphotransferase) domain 1 482 680 - -
Seca11g06819 682 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Seca11g06819 682 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g06819 682 Pfam Protein tyrosine and serine/threonine kinase 410 676 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06819 Seca-Chr11 168486435 168491751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06819 365 672 Trihelix Transcription Factor Family AT1G68690 50.641 3.20e-101 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Seca11g06819 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06819 - - aprc:113855006 1244.18