Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06810 ATGGCAGGTGCTATGAAGAAAGTCGACAAGATTCGCCAAATCGTTCGTCTAAAACAGCTCATGATGCGGTGGAAGCACATCAGTCTCCGCCGCCGTTCCCTCCCCTCCGAACCGGAGCCATGTTCCGCCGCTCGACGGCCACCCTCCGGTTTCCTCTTCGTCTACATCGGACCCGAACGCAAGCGTTTTGCCATCCCTGCTCGTTTCCTTAACCTCCCCGTATTCTCGGGTCTCCTCGACGAAACCGAGGAGGAGTTTGGGCTCCGAGGTAATGGTGGTTTGGTTCTGCCCTGTCAAGTGGGTTTCTTCAGACACATCATCAAGCATCTCCACAAGGACGAACACAAGTTCGGGAAACTCTCTCTGGAAGAGTTTGTTAAAATGTTCTCTGAGATGGCTTCAGATTATCCTTGCAAGGAAAACGTCGTCGCTTTTGTTCCTCTGTTGCAGAAAGCAGAGGTTTAG 465 0.5226 MAGAMKKVDKIRQIVRLKQLMMRWKHISLRRRSLPSEPEPCSAARRPPSGFLFVYIGPERKRFAIPARFLNLPVFSGLLDETEEEFGLRGNGGLVLPCQVGFFRHIIKHLHKDEHKFGKLSLEEFVKMFSEMASDYPCKENVVAFVPLLQKAEV. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06810 154 Pfam Auxin responsive protein 16 109 IPR003676 GO:0009733
Seca11g06810 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06810 Seca-Chr11 168395673 168396137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06810 7 108 Calmodulin-binding Proteins AT3G43120 30.827 9.29e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06810 K14488 - gmx:100797463 224.942