Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06764 ATGGAGGACGATGAAACCAAAGGAAGAATCGAGGAAACTGTTCGGAGGATTTTGGAAGAATCTGACATGGACAAGGTTACTGAGTCCAAAATCCGAAAGCAGGCCTCCAGTGAACTGGGCCTCGACCTATCTCAGCCTCACTTCAAAGCCTTCGTGAAACAGGTCGTAGAAGCTTTTCTCCAAGAGAAGCAACAACAACAGGAGGAGGAGGAGGAAGAACAGCAACAGGGTGCTTCCAAGGACAAGGAGTTCGATGATGAGGGCGATCTCATCATCTGCAAGAAAAATATTTTTGGATTTCAGCTTTCAGAGAAGAGAAAAGTGACCATCCAGGATTTCAGAGGAAAAACCTTGGTCTCCATTCGGGAGTTTTATAGAAAAGATGGCAAAGAGCTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGTCAACCTTCAAGAAAAATGTGCCTGCCATAGAAAACGCCATTAAGAAAATGGAGTCACGCACATAA 501 0.4471 MEDDETKGRIEETVRRILEESDMDKVTESKIRKQASSELGLDLSQPHFKAFVKQVVEAFLQEKQQQQEEEEEEQQQGASKDKEFDDEGDLIICKKNIFGFQLSEKRKVTIQDFRGKTLVSIREFYRKDGKELPTSKGISLTEEQWSTFKKNVPAIENAIKKMESRT. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06764 166 Pfam Transcriptional Coactivator p15 (PC4) 100 151 IPR003173 GO:0003677|GO:0006355
Seca11g06764 166 PIRSF RNA_polymII_KELP 1 166 IPR017415 -
Seca11g06764 166 MobiDBLite consensus disorder prediction 62 84 - -
Seca11g06764 166 Gene3D - 2 63 - -
Seca11g06764 166 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 165 IPR045125 GO:0003713|GO:0060261
Seca11g06764 166 SUPERFAMILY ssDNA-binding transcriptional regulator domain 100 161 IPR009044 GO:0003677|GO:0006355
Seca11g06764 166 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Seca11g06764 166 Coils Coil 53 80 - -
Seca11g06764 166 FunFam RNA polymerase II transcriptional coactivator KELP 82 165 - -
Seca11g06764 166 SUPERFAMILY DEK C-terminal domain 6 61 - -
Seca11g06764 166 Gene3D Transcriptional Coactivator Pc4; Chain A 84 165 IPR009044 GO:0003677|GO:0006355
Seca11g06764 166 Pfam DEK C terminal domain 6 60 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06764 Seca-Chr11 167975312 167977688 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Seca11g06764 DEK_C 5.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06764 K25815 - gmx:100305633 242.662