Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06734 ATGGAAGGAATGCAAGAAATTAGAAAAACAGAGCTTGAACTCCTCCACGATGGTGTTGATATCGGATCATGCTTATCAAATCTCATATTATCAACCACAACAAACACACTCGACACAATTTTCTCTTATTGCTCGCCACCAAACGCCACTATCTTGGATCCATTAACCTCTTTTGGTTCCTCAGTGTACCACCCCCAAAGAGACATCCTTCAAAAGTTCTATCACGAAAATCGTTTGAGGTTGATGAGTGAATATTATGTTCCCAATTGCTTGAAAAATCCAGTATTTAAGAAAAAAGCATACAGGGAAGTGAGACAGAGGCATTGGGGAAAATGGGTAGCAGAGATTAGACTCCCTCAGAATAGAGTGAGGGTGTGGTTGGGCACTTATGAGACTCCTGAAGTTGCTGCTTATGCTTATGATTGTGCTGCTTCTAAGCTCTGA 444 0.4122 MEGMQEIRKTELELLHDGVDIGSCLSNLILSTTTNTLDTIFSYCSPPNATILDPLTSFGSSVYHPQRDILQKFYHENRLRLMSEYYVPNCLKNPVFKKKAYREVRQRHWGKWVAEIRLPQNRVRVWLGTYETPEVAAYAYDCAASKL. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06734 147 Pfam AP2 domain 102 147 IPR001471 GO:0003700|GO:0006355
Seca11g06734 147 CDD AP2 101 147 IPR001471 GO:0003700|GO:0006355
Seca11g06734 147 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Seca11g06734 147 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Seca11g06734 147 SMART rav1_2 100 147 IPR001471 GO:0003700|GO:0006355
Seca11g06734 147 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 32 147 - -
Seca11g06734 147 SUPERFAMILY DNA-binding domain 100 146 IPR016177 GO:0003677
Seca11g06734 147 ProSiteProfiles AP2/ERF domain profile. 100 147 IPR001471 GO:0003700|GO:0006355
Seca11g06734 147 Gene3D AP2/ERF domain 99 147 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06734 Seca-Chr11 167698124 167698567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06734 20 129 AP2-EREBP Transcription Factor Family AT1G64380 41.611 1.20e-24 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Seca11g06734 AP2 2.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06734 - - csin:114269781 149.443