Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06730 ATGGTTTCAACAGTGCAAGAGAAATTGAAGGGGTTTGTGGGGCACAGATGGGTGGTGTTTGTGTGTGCAATGTGGGATTTGTCATTTGCTGGGACGGCTTACATGTTTGGGAGCATATCGCCGGTCATAAAGAGCACCATGGGTTTCAACCAGCAACAGGTGGTTTTGTTGAGTGTCGCCAAGGATTTGGGTGATTGCGTTGGGCTCCTGTCTGGGAAACTCAGTGAGGTATGGCCCACTTGGCGTGTTATGCTTGTTGGGGTCATCCAGAATCTTGTCGGTTACGGCCTTGTTTGGCTTGTTGTCACTCACAGCCTTCCTTCTTTGCCTCTCTGGACGTTATGCATTTCTATCTTTGTCGGACAAAATGGAGCAACATATTACAATACAGTTGCTCTGGTTTCTAGCGTGCAAAGTTTCCCCGAAAGCAGAGGGCCTGTGGTGGGGATATTGAAGGGATTTATTGGGTTAAGCGGTGCAATTTGGACTCAAATCATAGCTATGATCAATTTCCCAGATCAGGCATCTATAATTTTCATTATAGCAGTTGGACCTGCAATGGTTTCTTTCACCCTCATGTTCATTATAAGACCCGTTCAAAGTCACAAATACTCTAGAGCTTCTGATGAATCAGGCTTCATGTTTATCTATAGTGTTTGCCTTCTTTTGGCTGCTTATTTGTTGGGAGTTTTGTTGGTTGAGAATATGTTTGATTTGGAACAGAGCACCATCACATTATTTGCGGTTATTTTGATCATACTCTTATTGCTTCCAATTATAGTTCCTATTTTATTGGTTTTCTTCTTGAAGCCCAAAAGTCCTGATGAGGAAACCCTTCTGGAACCACCAATGCCAACAACAACAACAAAATCTATGCATGATGATGGTAGTGATGAAACTAATGTTAGTGATGAACATATTGAAGATGAGAATCCTCCAAAACTGGAGGTGCTTCCGCTATCACAAGGGCCAAGAGACAAATTTCAATTTCAAAGTAAACTTTTCCAAGTTGTGGAGAAAATCAAGCAAGAAAATGGCCCGAAAATAGGAGAAGATTTCACCTTAACCCAAGCACTGGTCAACGTTGACTTTTGGATCATGTTTTTATCTCTTGTCTTGAGCTCTGGATCGGGCATGGCAGTGATAAACAACATGGGTCAGATTTGTCAATCATTGGGAGATGACAGTGTCAATTTTTATGTATCAGTTATCAGCATATCGAACTTCCTTGGTCGTGTTGGTGGCGGCTACTTCTCAGAGGTTATAATAAGGAAAATTTGCCTACCCGAGACTTGTTGCATTGGCAGTGATTCAGTTAGTGATGTGTTTGGGACTGTTGTACTATGCGTTGGGGTTGGTTGGACAAGTTTACGTGTTGGCCATATCTATGGGTTATGGGTTTGGTGCCCAATGGTCAGTTGGGATAGCTGCAACTTCAGAACTATTTGGGTTGAAGAACTTTGGGACTCTGTACAATTTTCTTACTATGGCTAA 1494 0.4237 MVSTVQEKLKGFVGHRWVVFVCAMWDLSFAGTAYMFGSISPVIKSTMGFNQQQVVLLSVAKDLGDCVGLLSGKLSEVWPTWRVMLVGVIQNLVGYGLVWLVVTHSLPSLPLWTLCISIFVGQNGATYYNTVALVSSVQSFPESRGPVVGILKGFIGLSGAIWTQIIAMINFPDQASIIFIIAVGPAMVSFTLMFIIRPVQSHKYSRASDESGFMFIYSVCLLLAAYLLGVLLVENMFDLEQSTITLFAVILIILLLLPIIVPILLVFFLKPKSPDEETLLEPPMPTTTTKSMHDDGSDETNVSDEHIEDENPPKLEVLPLSQGPRDKFQFQSKLFQVVEKIKQENGPKIGEDFTLTQALVNVDFWIMFLSLVLSSGSGMAVINNMGQICQSLGDDSVNFYVSVISISNFLGRVGGGYFSEVIIRKICLPETCCIGSDSVSDVFGTVVLCVGVGWTSLRVGHIYGLWVWCPMVSWDSCNFRTIWVEELWDSVQFSYYG. 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06730 497 MobiDBLite consensus disorder prediction 292 308 - -
Seca11g06730 497 Pfam Nodulin-like 16 263 IPR010658 -
Seca11g06730 497 MobiDBLite consensus disorder prediction 278 308 - -
Seca11g06730 497 SUPERFAMILY MFS general substrate transporter 213 426 IPR036259 -
Seca11g06730 497 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 444 - -
Seca11g06730 497 SUPERFAMILY MFS general substrate transporter 15 199 IPR036259 -
Seca11g06730 497 Gene3D MFS general substrate transporter like domains 14 205 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06730 Seca-Chr11 167679393 167682426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06730 1 430 Nodulin-like Gene Family AT3G01930 53.089 1.11e-147 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06730 - - gmx:100784744 609.757