Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06724 ATGGAGAATGACTGGAGCTGGGATCAGAACACACTCATCAATGAGCTAATTCAGGGGATGGAGGTAGCAAGAAAGTTGAAGGAAGACTTGAGGACACCATATTCTGCTGACACAAGGGATTTGCAGGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACAAATTTTAAGATGGAATGAATCAACTTCCAAGTTGCAGACCATGAGTCCAGCAACAACTTTGTTACCAGAGTCCCCAATGTCTACCAATGGAAGTCCTCTAAGAGAGGAAGTTGATGGGGCCGTCCAGGATTACCAGGAGGTCAAGCAGGATTCAAAGAAAAGAAGTCCTAACGATATCTTTTTTAAAATTGGTTTCAGAAAGATTATGCCCAAATGGATGGACCAAGTAAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTCGGTGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGAACTGCTGGGCCACAAAGCAAGTACAGAGATCAGATGAAGATCCAACAATATTTGACATAACTTACAGAGGAAGGCATACCTGTTCTCAGGAAAATAATGCCGTTCTGCCACATAAGTCACCAGAAAAACAAGAGAAACCACGCAGTCATAATAATGATATTCACCATGCACAGCCATCCCAAGAAAGCCTTACAAAGTTTAGAAACACCTTGACCGTCAAAACGGATAACTTGGGAAATGAAGGAATGGCATGCCCTTTCACTTTCCCTTCCACTTCATTTGGAAGCATGACACAAGAAAACCACAACTTGATTCCTTTGGCCTTAGAGAATGATCCCTTCTTGGGCAGCCTTTTCCAAACACACTTGTTATCTCCAACAACACCAGAATCAAACTATTTTTCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGTTCTATAACAAGCCCCATTCAGAATCTGATATTACTGAGATCATTTCCACCAACACATCAGCCACCAATTCTCCAATTCCCGATTTCAATTTCTCACTTGATCCCGTGGAAATTGATCCAAACTTCCCTTTCAATACTCCAGGCTTTTTCTGCTGA 1119 0.4218 MENDWSWDQNTLINELIQGMEVARKLKEDLRTPYSADTRDLQVQRILSSYEKALQILRWNESTSKLQTMSPATTLLPESPMSTNGSPLREEVDGAVQDYQEVKQDSKKRSPNDIFFKIGFRKIMPKWMDQVRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQNCWATKQVQRSDEDPTIFDITYRGRHTCSQENNAVLPHKSPEKQEKPRSHNNDIHHAQPSQESLTKFRNTLTVKTDNLGNEGMACPFTFPSTSFGSMTQENHNLIPLALENDPFLGSLFQTHLLSPTTPESNYFSSPTFQMNEFDGFYNKPHSESDITEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFFC. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06724 372 SMART WRKY_cls 143 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06724 372 FunFam WRKY transcription factor 53 129 206 - -
Seca11g06724 372 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 302 IPR044810 GO:0003700
Seca11g06724 372 Pfam WRKY DNA -binding domain 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06724 372 Gene3D WRKY domain 130 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06724 372 MobiDBLite consensus disorder prediction 213 230 - -
Seca11g06724 372 SUPERFAMILY WRKY DNA-binding domain 142 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06724 372 ProSiteProfiles WRKY domain profile. 138 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06724 372 MobiDBLite consensus disorder prediction 204 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06724 Seca-Chr11 167661149 167664515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06724 6 275 WRKY Transcription Factor Family AT4G23810 44.178 1.61e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca11g06724 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06724 - - gmx:100815760 589.341