Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06712 ATGGCCAAGAAAGTACACATTAGTTTCTTTATCTTTTCAATGATTGGATTCATTATGTTGGTATCTGTGAGTTCAATGACAACTCACATTGTTGGAGACCATGCGGGTTGGAATTTGCCCAGTTGCCAAGAGTTCTATGAGGATTGGGCCAAGAAAAGAACCTTCGCAATTGGCGACATACTTCTTTTCAAGTACAACCCCGGGTTGAACACTGTAGTACAGGTAAACAAGGAGGACTACGAGTGTTGCACTACCAAAAACACCATCCATACATACTTTGATGGGAACACTGCTTTTACTTTGGACAAAGCAGGGGAATATTTTTTCTATAGTTCCGTAGGGAGGCACTGTGAGGCAGGCCTAAAGCTCCGGGTTACTGTTCCTCAGGGAAAGCACCCTTCTCATTAA 408 0.4314 MAKKVHISFFIFSMIGFIMLVSVSSMTTHIVGDHAGWNLPSCQEFYEDWAKKRTFAIGDILLFKYNPGLNTVVQVNKEDYECCTTKNTIHTYFDGNTAFTLDKAGEYFFYSSVGRHCEAGLKLRVTVPQGKHPSH. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06712 135 CDD Phytocyanin 27 127 - -
Seca11g06712 135 Gene3D - 26 135 IPR008972 -
Seca11g06712 135 ProSitePatterns Multicopper oxidases signature 1. 105 125 IPR033138 -
Seca11g06712 135 Pfam Plastocyanin-like domain 38 120 IPR003245 GO:0009055
Seca11g06712 135 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Seca11g06712 135 FunFam Cupredoxin superfamily protein 26 132 - -
Seca11g06712 135 PANTHER BLUE COPPER PROTEIN 26 128 IPR039391 GO:0009055
Seca11g06712 135 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06712 Seca-Chr11 167564037 167565164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06712 11 127 Phytocyanin Superfamily AT4G31840 38.136 1.26e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06712 - - gmx:102660389 169.859