Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06708 ATGAACGACGCAGATGTCTCCAAGCAAATCCAGCAGATGGTGAGGTTTATCCACCAGGAAGCTGAGGAAAAAGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATCGAGAAGCTGCAGTTGGTCGAAGCCGATAAGAAGAAGATCAGGCAAGAGTACGAGCGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAAATTGAATACTCAATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAAGCTCAAGATGACGTGGTTAATTCCATGAAAGATGCAGCATCCAAGGAACTTTTGAATGTGAGCCATCATCATCATACATACAAACACCTTTTGAAAGATCTCATTGTTCAGAGTTTGCTAAGACTGAAAGAACCTTCTGTCTTATTGAGATGTCGGAAACATGACCTGCATTTAGTAGAGCATGTGCTGGATTCTGCTGCACAGGAGTATGCTGATAAAGCAAATGTTCATCCACCAGAGATCATTGTTGACAAAAATGTCTATCTTCCACCTGCACCCAGCCATCACAATACACATGATCCCTACTGGTAA 561 0.4296 MNDADVSKQIQQMVRFIHQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKDAASKELLNVSHHHHTYKHLLKDLIVQSLLRLKEPSVLLRCRKHDLHLVEHVLDSAAQEYADKANVHPPEIIVDKNVYLPPAPSHHNTHDPYW. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06708 186 Gene3D - 1 62 - -
Seca11g06708 186 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 181 IPR002842 GO:0033178|GO:0046961|GO:1902600
Seca11g06708 186 Gene3D - 91 178 IPR038495 -
Seca11g06708 186 SUPERFAMILY V-type ATPase subunit E-like 87 161 - -
Seca11g06708 186 Coils Coil 41 61 - -
Seca11g06708 186 Pfam ATP synthase (E/31 kDa) subunit 16 172 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06708 Seca-Chr11 167514751 167518465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06708 1 186 Primary Pumps ATPases(2) AT1G64200 73.958 7.88e-100 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06708 K02150 - gmx:100500452 323.939