Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06684 ATGGATGAGCTTGCGTGCTTGATGGACTGGGATTTGGAAGCTATTGTGAGAGGATGCAACGGTGAAGCACCAACAGCCACCATCATGGACGACCCACATCTCAATTTTTCTCATTTCTTCTCAGAACAAGATGAGCTACTTGGCAGTTTTCCTCAATTCTCAGAAACCACTAATGTCTTTGATGAATTGGAAGAGCTCTACAAACCTTTCTATCCAGTTTTGCACCCTCTTTCATCACAGACCATAGTCACAAGTTCCTTACCTATCCCCAAAGAACCTGAAGAAGCCAAAGTACTAAAAGCATCAGAGAAAGCAGCTTCACAAGATTTGCAAAAAGCATCAGAGAAAGCAGCTTCACAAGATTTGCAAGTTCCCACAGTATCTAAATATAAAAGAAGCAAGAAGAACCAGAACAAGAGTGTGGTCATGAAACAGGTGACAGCAGGGGATGGTGTGTGTGATGCTGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCACCTTATCCTCGCAGCTACTATAGATGCAGCAGTTCCAAAGGATGCTTGGCAAGGAAACAAGTTGAAAGGAGCAATTTGGATCCAGGAGTTTTTTTGGTTACATACACAGCAGAACACAATCATCCCCAACCAACTCGCAGAAATTCATTAGCAGGGAGCACCAGGAATAAGAACAATTCCATGGTTACACATCCAATTCCAAGAAGTGGTGACCAACAACACACCTGTTCATCAAATTCCTCATCAACAGAAACTGATCACTCTCCAAGGACACCTAATTTGGTGGTGGTGGCCTCATCCAACATTGAAGATGAGCTTGTGACAAGTGTGCAACAAAGTAATAAAGGCTTGGAGAAAGGGGAAGATTTTCTTGAGTGGTTGGATGATGCTGAAGGTGGTGATGGTTGGATTCCAAGCATAGAGTTGGAAGAACTCATAGGACTTAAGTTCCAACAATTTGTTGATGGCTGCGGTTTCACGGATGGTTTTGCTGACACTTAG 1014 0.432 MDELACLMDWDLEAIVRGCNGEAPTATIMDDPHLNFSHFFSEQDELLGSFPQFSETTNVFDELEELYKPFYPVLHPLSSQTIVTSSLPIPKEPEEAKVLKASEKAASQDLQKASEKAASQDLQVPTVSKYKRSKKNQNKSVVMKQVTAGDGVCDADAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSNLDPGVFLVTYTAEHNHPQPTRRNSLAGSTRNKNNSMVTHPIPRSGDQQHTCSSNSSSTETDHSPRTPNLVVVASSNIEDELVTSVQQSNKGLEKGEDFLEWLDDAEGGDGWIPSIELEELIGLKFQQFVDGCGFTDGFADT. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06684 337 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06684 337 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 267 IPR044810 GO:0003700
Seca11g06684 337 SUPERFAMILY WRKY DNA-binding domain 154 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06684 337 ProSiteProfiles WRKY domain profile. 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06684 337 MobiDBLite consensus disorder prediction 209 262 - -
Seca11g06684 337 Gene3D WRKY domain 139 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06684 337 MobiDBLite consensus disorder prediction 208 262 - -
Seca11g06684 337 SMART WRKY_cls 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06684 Seca-Chr11 167251298 167252868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06684 1 230 WRKY Transcription Factor Family AT4G23550 50.870 2.31e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca11g06684 WRKY 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06684 K13426 K13425 gmx:102663255 353.599