Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06657 ATGGATGCATCAACGGCTTTAATGTTCTTATCAGCGATAGCTGCCTATTTAATATGGTTCTCATTCATAACTCGACCACTCAGAGGTCCACGTGTCTGGCCCCTGTTGGGTAGCCTTCCGGGTCTCATCCAACACGCTAACCGCATGCACGACTGGATCGCAGACAATCTCCGCGCGTGTGGCGGCACGTACCAAACCTGCATATGCGCCATCCCCTTCCTCGCCAGAAAGCAGTGTCTCGTGACCGTCACGTGCGACCCAAAGAATCTCGAGCACATCCTCAAGCTCCGATTCGACAACTACCCCAAAGGCCCAACCTGGCAATCCGTATTTCACGACCTTCTCGGGGATGGCATCTTCAATTCAGATGGTGACACGTGGCTGTTCCAGCGTAAGACTGCCGCACTGGAATTCACCACCCGCACCCTACGTCAAGCCATGGCTCGCTGGGTCAACCGAGCCATCAAGCACAGATTCTGTCCCATCTTAGCCGCGGCTCAAGAAAACAAGACCCCAGTAGATCTCCAGGACCTCCTGCTTCGCCTCACTTTCGATAACATATGCGGCTTGGCTTTCGGTCAAGACCCACAGACTCTCGCTGTGGGACTTCCGGAGAATGGTTTCGCGCTTTCGTTTGATCGTGCCACGGAAGCCACCCTGCAGCGCTTCATTTTGCCGGAGATCGCTTGGAAGTTGAAGAAGTGGCTCCGGCTAGGCATGGAAGTGCGTCTGAGTCGAAGTCTCAAACACATAGACCAATACCTCTCCAACATTATCGAGAAGCGCAAACTAGAGCTACTGAACAACCAACAGAATGGCGGTGGCGGTGGCGGTGGGGGCCTCCATGACGACCTGCTGTCCCGGTTCATGAAGAAAAAGGAATCCTACACGGACGAGTTCCTCCAACACGTGGCACTCAATTTCATCCTTGCAGGACGGGACACGTCATCGGTGGCGCTCAGCTGGTTCTTCTGGCTCTGTACCAAAAACCCAAGGGTGGAGGAAAACATCCTGATCGAGCTATGCACCGTTCTGATGGAGACACGTGGCGGGGATGTCTCTAAGTGGATAGATGAGCCTCTGACTTTCGAGGAGGTTGACCGGTTGGTGTACCTCAAGGCTGCACTGTCGGAGACGCTACGGCTTTACCCATCGGTGCCAGAGGACTCCAAGTATGTCGTGAAGGACGACGTTTTGCCGAGCGGGACGTTCGTTCCGGCGGGTTCGGCGGTGACGTATTCGATTTACTCTGTTGGGAGGATGAAGTTCATTTGGGGCGAGGACTGCCTTGAGTTCAAGCCAGAACGGTGGCTCTCCGCCGACGGTGACAAGATTCAGATGCAGGACTCTTACAAGTTTGTTTCGTTCAATGCGGGACCCAGGATTTGCCTGGGAAAGGACTTGGCCTACCTGCAGATGAAGAACATCGCCGCGTCGTTGCTGCTGCGCCATCGCCTCACGGTGGCGCCGGAACACCGTGTGGAGCAGAAGATGTCGTTGACGCTGTTCATGAAGTATGGGCTGAGGGTGAATGTGCATCCAAGGGATCTCAGGCCGGTGCTGGAAAAGGTTCGTGGTGTTGCTCAAAAAGGTTTTTGA 1599 0.546 MDASTALMFLSAIAAYLIWFSFITRPLRGPRVWPLLGSLPGLIQHANRMHDWIADNLRACGGTYQTCICAIPFLARKQCLVTVTCDPKNLEHILKLRFDNYPKGPTWQSVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILAAAQENKTPVDLQDLLLRLTFDNICGLAFGQDPQTLAVGLPENGFALSFDRATEATLQRFILPEIAWKLKKWLRLGMEVRLSRSLKHIDQYLSNIIEKRKLELLNNQQNGGGGGGGGLHDDLLSRFMKKKESYTDEFLQHVALNFILAGRDTSSVALSWFFWLCTKNPRVEENILIELCTVLMETRGGDVSKWIDEPLTFEEVDRLVYLKAALSETLRLYPSVPEDSKYVVKDDVLPSGTFVPAGSAVTYSIYSVGRMKFIWGEDCLEFKPERWLSADGDKIQMQDSYKFVSFNAGPRICLGKDLAYLQMKNIAASLLLRHRLTVAPEHRVEQKMSLTLFMKYGLRVNVHPRDLRPVLEKVRGVAQKGF. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06657 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Seca11g06657 532 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 FunFam Cytochrome P450 21 518 - -
Seca11g06657 532 Pfam Cytochrome P450 28 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 CDD CYP86A 67 508 - -
Seca11g06657 532 SUPERFAMILY Cytochrome P450 27 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06657 532 PANTHER CYTOCHROME P450 20 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06657 Seca-Chr11 166920018 166922585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06657 1 525 Cytochrome P450 AT2G45970 75.095 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06657 K15398 - gmx:121174913 939.488