Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06656 ATGCCGTCATGGTGGGGAAAGTCTCCATCCAAAGAGGCGAATAGGAAGGCAAATAGGGAAAGTATTCTTGATACAATACAGCGGAAATTAAAGAATGCTTCTGAAGAGAAGCGCAACAACAAATCAGGAGGATCAAGGAGACATCATAGTGGCGCTATCCCAGAGAAGGGATCTAAATCCATCATACCTTCAAGATCACCATCACCCTCTATGCATGCATCGCGCTGCCAAAGTTTTGATAAAAGACATCAATCTCAGCCACTCCCTTTGCCAGGCTCACACCTTCCTACTGTTGATGATGCAGATTCTGCAATTATTTTAACATCAAAACTGCAAAAAGCCAGGGGCTCTAAACCATCTATATATTGTCCTCTACCAAAACCTGGTTATGTATCTAACAGGGGAGATCCGACAGATGCTGAAGGAGATATAGCCACTGCATCTGTTTCCAGTGATAGCTCTATTGACAGTGGTGACTCAGCTGATTCACAACTTGTTAGTCCTCTGGAATCCGACTGTGAAAATGGAAACAGAGCCACTATTAATAGTTCATTTAGGATGGTGCACAAGGATCAATTGACTGTTATACAAAGAAACTCAAGAGTATCCTCAAAACCAGCTCCTCAGTTGTGCAATAATAAGCTTTTATATACATCAGCAAGAGGGGTTCCCTTGCATCTGCAAAATCTGCAAATAGCTCGTCCAGGTGGATTGTGCAGTGCTCCAAATAGTTTAATGTCAAGTCCTTCTAGAAGTCCAATGAGAGCATTTGGGCCTGAGCAAGTGTTGAACTCTGGATTCTGCACAGGAAAACCTTATCCAGATATAGCTTCTGGGCACTGCTCTAGTCCTGGTTCATGCCATAAATCAGTTGGTGAGGATCCGTCACGACAGATATTTTGTCCACACAACCGGTGTAGCCCTGAGTGTTCTCCAATACCTAGTCCCAGAATAACAAGCTCAGGTCCTAGTTCCAGGATACAGAGTGGTACTGTCACCCCTCTGCATCCACAAGTTGGATGTGCTGTAGCAGAATCACCAAGAAGACGTCCTGACGACATGAAAAAACAAACTCACCGTTTACCACTTCCTCCAATAACAGTCACTAAATCTCGTCCATTTTCTCCAACCTATTCTGCATCCACAACTCCCACCCCTCGTAGTCCTGCCCGAGCAGAAAATCCAGCAAGCCCAAGTTCACGCTGGAAGAAGGGGCAGTTGCTTGGAAGGGGAACGTTTGGGCATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTCTCAGATGATGCTAAATCAAGGGAATGTGCGCAGCAACTTGGCCAAGAAATTGCATTGCTAAGTCAGTTGCGGCATCCAAATATAGTCCAATATTATGGATCTGAGGAGGTAGATGACAAGCTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTAGTTCAAGAATATGGCCAATTGGGTGAAATTGCTATTCGTAATTACACTCGGCAAATTCTGTCTGGGCTTGCATATTTACATGCTAAGAACACTGTTCACAGGGACATCAAAGGAGCAAACATATTGGTGGATCCTAATGGCAGGATAAAATTAGCAGATTTTGGGATGGCAAAGCATATTAGTGGCCAGTCTTGTCCATTTTCTTTCAAAGGAAGTCCATATTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGTTGTAATCTTGCTGTTGATATTTGGAGTCTGGGATGCACTGTTTTGGAGATGGCAACAACAAAACCTCCTTGGAGCCAGTATGAAGGGGTTGCTGCTCTGTTTAAGATTGGGAACAGCAAGGAACTTCCTACTATTCCAGATCATCTATCAGAAGAGGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGGAATCCACTAAATCGTCCCTCAGCTGCTCAACTTCTAGAGCATCCATTTGTAAAAAATGCTATGCTGGAAAGACACATTTTGACTGCTTCTCCTTCAGAAGCACCAGCCGCTATTATAAATGCAGTGAGATCTCTGGCCATTGGACCTGCAAAACCTAATTTATGCTTAGACTCGGAAGTGGCTGGTATCTATCCGTCTAGAAGCTTGAGAGCTGTTTCTGGATCAAGTGATGCACATACACCAAGGAACTTGTCGTGTCCCATTTCTCCCTCTGGGAGCCTACCTTTGCCTTCTAGATCATTGCATGCGAGTGGAAGGATGTCTCCCTCTCCGATATCTAGTCCCCATACTGCATCTGGCTCATCTACACCTCTCACCAGTGGTGGTGGTGCTATCCCATTTCATCGAACAAAGCAACAAATACTCTCATATGAAGATGTGGGTATGATCCAAAAGTCTCAGAATGGCTTTTATTCAAGTGGAAACACTGCCTATCTGGGTTCAGGGAGAAGAACGCAAACTACACATGCTTGCCGGGATATAGCTTCATCTGATAATGACATTCTTGCAAACCATGATATGAGGGCTGTACAGGGAGATCCAAGAGAATTTCGTGAGGGGAAGTCATATTTGGTTGATTGTATGTCGCAACAGTTGTTGAGGGATTATATGCGGCTAAATGCATCCCTAGGTATTATGCCCAGTTCCCCGATGCTTGGTCGCAAAAATGGCTATGATCGGCATGTTAGTGATCAGACGGAGACACTGGGCATGTGA 2700 0.4396 MPSWWGKSPSKEANRKANRESILDTIQRKLKNASEEKRNNKSGGSRRHHSGAIPEKGSKSIIPSRSPSPSMHASRCQSFDKRHQSQPLPLPGSHLPTVDDADSAIILTSKLQKARGSKPSIYCPLPKPGYVSNRGDPTDAEGDIATASVSSDSSIDSGDSADSQLVSPLESDCENGNRATINSSFRMVHKDQLTVIQRNSRVSSKPAPQLCNNKLLYTSARGVPLHLQNLQIARPGGLCSAPNSLMSSPSRSPMRAFGPEQVLNSGFCTGKPYPDIASGHCSSPGSCHKSVGEDPSRQIFCPHNRCSPECSPIPSPRITSSGPSSRIQSGTVTPLHPQVGCAVAESPRRRPDDMKKQTHRLPLPPITVTKSRPFSPTYSASTTPTPRSPARAENPASPSSRWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLFSDDAKSRECAQQLGQEIALLSQLRHPNIVQYYGSEEVDDKLYIYLEYVSGGSIYKLVQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGRIKLADFGMAKHISGQSCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAALFKIGNSKELPTIPDHLSEEGKDFVRLCLQRNPLNRPSAAQLLEHPFVKNAMLERHILTASPSEAPAAIINAVRSLAIGPAKPNLCLDSEVAGIYPSRSLRAVSGSSDAHTPRNLSCPISPSGSLPLPSRSLHASGRMSPSPISSPHTASGSSTPLTSGGGAIPFHRTKQQILSYEDVGMIQKSQNGFYSSGNTAYLGSGRRTQTTHACRDIASSDNDILANHDMRAVQGDPREFREGKSYLVDCMSQQLLRDYMRLNASLGIMPSSPMLGRKNGYDRHVSDQTETLGM. 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06656 899 MobiDBLite consensus disorder prediction 144 174 - -
Seca11g06656 899 MobiDBLite consensus disorder prediction 364 405 - -
Seca11g06656 899 MobiDBLite consensus disorder prediction 712 769 - -
Seca11g06656 899 Coils Coil 16 36 - -
Seca11g06656 899 SMART serkin_6 402 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g06656 899 MobiDBLite consensus disorder prediction 370 401 - -
Seca11g06656 899 MobiDBLite consensus disorder prediction 312 334 - -
Seca11g06656 899 ProSitePatterns Protein kinases ATP-binding region signature. 408 431 IPR017441 GO:0005524
Seca11g06656 899 MobiDBLite consensus disorder prediction 61 84 - -
Seca11g06656 899 Gene3D Transferase(Phosphotransferase) domain 1 399 680 - -
Seca11g06656 899 CDD STKc_MEKK1_plant 401 658 - -
Seca11g06656 899 MobiDBLite consensus disorder prediction 313 334 - -
Seca11g06656 899 MobiDBLite consensus disorder prediction 117 174 - -
Seca11g06656 899 FunFam Mitogen-activated protein kinase kinase kinase 400 682 - -
Seca11g06656 899 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 54 670 - -
Seca11g06656 899 MobiDBLite consensus disorder prediction 12 54 - -
Seca11g06656 899 Pfam Protein kinase domain 403 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g06656 899 MobiDBLite consensus disorder prediction 1 97 - -
Seca11g06656 899 MobiDBLite consensus disorder prediction 712 773 - -
Seca11g06656 899 SUPERFAMILY Protein kinase-like (PK-like) 400 739 IPR011009 -
Seca11g06656 899 ProSiteProfiles Protein kinase domain profile. 402 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06656 Seca-Chr11 166906824 166913859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06656 1 884 MAP Kinase Kinase Kinase AT1G63700 58.333 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca11g06656 Pkinase 1.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06656 K20717 - gmx:100814422 1180.62