Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06652 ATGGCGAGAAGATCTCCTCCTGTGGTTAACGAGACAGGTTGCACGTGGCGAATGTTTGGAATCTTTAATTCTCGTGATGGCCATTCCGACAGAAGATTGGTTTCCAATACGAGGCATTCCCATTTGCTTACACATTCCACTGCTACAGGAAATGGAAACTCGAGAAGCAGCTCATATGTGCTTAGCAGAATTGATGAAAAGTACCCTCACATTGGTGTAAGTTCCAGAAGAAGAAGGAATTATGGTTGTAAAAGTATCAGCTGCTTGGAGAATGATCAGGTAGCAGATTGGGGGAATGAAGTGACAAAGATGATTGTTGATCAGAGATTTTTCAAAAAAAATTATCAAGGGAAAGATGGGGCAGGCTATAAGCCTGATCAATTCTTGGATGCTTTACAGGTTTTATATTCAAACAAGGAACTTTTTGTAAAACTTATGCAAGATCCAAACTCTCTGTTAGCAAAACAGTTTCATGACTTACAGAGTTCTCAAGTGACAGAACCATCTCAGGCAAGGCAAAAAAGGATGAACAGATTGAATAAATCTCAAAACAGTAACGCTAGAAAAAATGTAAAAAATTTCAAGTCCTCTGATAGATATCATTCAAGTTGTGAACCTCAGTCCTCAGAAAGAATAGTAGTTTTGAAGCCTGGCACAAGTAGCTGTGACTGTCCTAGGCCTCATTCTTCTAGTAGCTTCAGTCACAATGCTCAAAATATTAAGCTTTCACATTTTCCTTTTGGTCGTATAAAGAGAAAGTTAAGGCATGTCATGAGTGTAAGGAGTAAAGATCAACAGCAGAGGAGGACTACTGCTGGAGTGCCATATGAATTTCCTTGCGGTGGTAAAGAAGTAAAAGAATTGGAAATTGCTGGAAGAAATTCACCAATTAACAGGTTGAAAAATTCTGAGTCATGTATGGGACAGGAAGCTGCTTCATTTGGTGAAAGTTGCAGTAACAACACAAATAACACTTCAGTAAGCCCTTCTGAGCAAAACACATTGAACATACATGATGGAGATAACAAAAGTCCATCTCAGATGTTTAACTGTGGAATTGAGGAATATAAACAGTGCACAAACTCTCTAGTCAGAACAATTCCTCTTCCTGACACTGGAAGGATGATAGATTATAACAAGGATCAAATGGTCCTCAGAACCAAGTTGGGGCTTCAGAAAGATGAGGAAAATTATTCCTTTAGTTCTTCTGGTCAGAAAATCAAGGATCCATCAGTGGCCACTGTTAATACACCTGGTGATGAGTTGCAGGATTTTGGTGCAGATATTAGTACAAGAAAGAGTTTTCCTTGCGACAATTTGCATGCACATTATGATACTCCTAGAGATTGCGGAAATAAGGACAGTCCTACTCAGAATTTCAACATAGATGATTTCACTCAACCAGATGAGTCACCAGTGCAAGTTATACATGATAAATTTGAAGAAAACCATTTTGCAGACCTTATAAGATCCTCTTTGGATCCAATAAACAAGTTAACCTCTTCCAAGGACATGTTAGACTACTTAAGGGAAATTGTGCAGGCTTTTACCTTGAAATGGGATGAACTTACTATGAAGAGTGCTTCATCTGACCTATTGATGGATTCATCCATCTTTGATGAACTGAAGGGATTAACTGGCCCTAAAATCTTGCATGACTGTAGCATTGAAACTTTCATGAAGGTATACCAGAACTGTTGTTTCTCACCTCATCAAAATGTCCAAGCATGTGTTGTAAAAAATGTTCTGGCTAAAGAGATTGCAGAACTGGTTAACTTGCACTTTCTCCCTCGTCTATCACCAATAACGTTGCAACAACTTGTTGAAAAGGACTTAGCAAAACGTGGATCATGGCTAAATATCCAAGTTGATACAGAAGACATTGCAATAGAGGTGGAGAAAGATATTCTGGAAAAACTGGTATTGGAAATAGCATCTGAGATGGATGATAAAGCACTTTGA 1962 0.3858 MARRSPPVVNETGCTWRMFGIFNSRDGHSDRRLVSNTRHSHLLTHSTATGNGNSRSSSYVLSRIDEKYPHIGVSSRRRRNYGCKSISCLENDQVADWGNEVTKMIVDQRFFKKNYQGKDGAGYKPDQFLDALQVLYSNKELFVKLMQDPNSLLAKQFHDLQSSQVTEPSQARQKRMNRLNKSQNSNARKNVKNFKSSDRYHSSCEPQSSERIVVLKPGTSSCDCPRPHSSSSFSHNAQNIKLSHFPFGRIKRKLRHVMSVRSKDQQQRRTTAGVPYEFPCGGKEVKELEIAGRNSPINRLKNSESCMGQEAASFGESCSNNTNNTSVSPSEQNTLNIHDGDNKSPSQMFNCGIEEYKQCTNSLVRTIPLPDTGRMIDYNKDQMVLRTKLGLQKDEENYSFSSSGQKIKDPSVATVNTPGDELQDFGADISTRKSFPCDNLHAHYDTPRDCGNKDSPTQNFNIDDFTQPDESPVQVIHDKFEENHFADLIRSSLDPINKLTSSKDMLDYLREIVQAFTLKWDELTMKSASSDLLMDSSIFDELKGLTGPKILHDCSIETFMKVYQNCCFSPHQNVQACVVKNVLAKEIAELVNLHFLPRLSPITLQQLVEKDLAKRGSWLNIQVDTEDIAIEVEKDILEKLVLEIASEMDDKAL. 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06652 653 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 75 - -
Seca11g06652 653 Pfam Protein of unknown function (DUF3741) 107 151 IPR022212 -
Seca11g06652 653 MobiDBLite consensus disorder prediction 163 191 - -
Seca11g06652 653 MobiDBLite consensus disorder prediction 163 209 - -
Seca11g06652 653 MobiDBLite consensus disorder prediction 317 343 - -
Seca11g06652 653 Pfam Domain of unknown function (DUF4378) 506 643 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06652 Seca-Chr11 166866465 166871233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06652 449 646 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 27.477 5.22e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06652 - - gmx:100813885 622.468