Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06644 ATGATCATTCCGGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTATGCTACGCAAAGAAGGATTATAATTTAGCAAAGCACCCAGATATCGATGTGCCAAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCTAGGGAGTACGTTAGAGAGACCTTTGCTTGGATGAACTACTATTGGTTCCTCACAAACGAAGGCATTGAATTCCTCAGAGGATACCTTAATCTTCCTTCTGAAATTGTTCCTGCTACTTTGAAGAAACAAGCCAAGCCCCCCGGTAGATCATTCGGTGGTCCCGGTGATCGCCCTAGGTTGGACAATTTGAACAGGGGTCCACCACGCTTTGACGGAGAACGTAGATTTGGTGGTGACCGTGATGGGTACCGTGGAGGTCCCCGAGGACAGGGTGGTGACTTTGGAGGAGACAAGGGAGGAGCTCCTGCTGACTACAGACCCTCCTTTGGGGTAATCTTGTTACTTCTTAACACCACTACTCTTTCTCCATCGTTCAATTCATGTTTAATATATTTGTGTTTTGCCATTTGTTTGTGCCCTAGTTTTCTTTTTTTGCTTAGTTTTTTTTCAATTAGTAATGATAGATTCCCCTCTCCCAGAAATTGTTTGATCTACGTGATCTAA 657 0.4414 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNEGIEFLRGYLNLPSEIVPATLKKQAKPPGRSFGGPGDRPRLDNLNRGPPRFDGERRFGGDRDGYRGGPRGQGGDFGGDKGGAPADYRPSFGVILLLLNTTTLSPSFNSCLIYLCFAICLCPSFLFLLSFFSISNDRFPSPRNCLIYVI. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06644 218 Pfam Plectin/S10 domain 3 94 IPR005326 -
Seca11g06644 218 PANTHER 40S RIBOSOMAL PROTEIN S10 1 161 IPR037447 -
Seca11g06644 218 MobiDBLite consensus disorder prediction 113 133 - -
Seca11g06644 218 MobiDBLite consensus disorder prediction 94 148 - -
Seca11g06644 218 Gene3D - 1 103 IPR036388 -
Seca11g06644 218 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06644 Seca-Chr11 166819505 166821310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06644 1 160 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 74.375 1.03e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06644 K02947 - gmx:100499910 236.113