Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06630 ATGAAGCTCAAAGTATATGCAGACCGTATGTCCCAGCCATCCCGTGCGGTTCTTATCTTTTGCAAAGTAAATGGAATAGATTTTGAGGAGATCAAAGTGGAACTATCCAAACGTCACCAGTTATCTCCTGAATTTCAAGCGATTAACCCTTTCAGGAAAGTCCCTGCTATTGTTGATGGAAGGTTCAAACTATTTGAGAGTCATGCTATTCTTATCTACCTTGCTTCTGCCTTTCCAGGAGTTCCAGACCATTGGTACCCAGCTGATGTTTCTAGGAGAGCTAGAATACATTCTGTGTTAGATTGGCATCACCTGAATTTGCGCCGTGGAGCAGCCGCATATGTTCTAAATACTGTACTAGCTCCATTATTGGGTCTGCCACTAAACCAACAAGCAGCTGCTGAAGCCGAGAAAACTTTGATATCATCTCTGTCCAAAATAGAGAACATTTGGCTTAAGGGGAACGGAAAGTACTTGCTTGGTGGCTTGCAACCGTCCATAGCAGATCTCAGTCTGGTTTGCGAAATAATGCAATTAGAGCTTTTAGATGAGAATGATCGTAATCGTATTCTTGGCCCGCACAAGAAAGTTCAGCAGTGGATTGAGAGCACAAGAAATGCAACGAGGCCTCATTTTGATCAAGTTCATAATGTCCTTTTTAAGCTCAAAATGAAGCTTTCAGTGCAGCAATCTAGTCAGGCAGGCATAATGGAATCTAGGATGAAAGCCCCACTAACTTCAAAGGTTTTGAAAAGGTTCAACCGAATTGACTTCGAGGAGATTAAAGTTGAACTTTTCAGACGTGAGCATCTGTCTCCTGAATTCACAGAAGTAAACCCCATGCAGAAAGTTCCAGCTATTGTTCATGGAACCTTCAATCTCTTCGAGAGCCATGCAATCCTTATCTATCTTGCTTCTGCTTTTCCTGGAATTGCTGACCATTGGTATCCAACTGATCTTTTCAAAAGAGCCAAAATTAACTCAGTATTGGATTGGCATCACTCTAATTTACGACACGGAGCAGTGAACTATGTAATAAATACTGTATTAGGACCTGCACTTGGCCGTCCTCTGAATCCAAAAGCAGCTGCCGAAGCAGAGAAAGTTTTACTATCTTCTTTATCAAAACTAGAGGACTTTTGGCTCAATGGAGATGGGCGCTTCCTGCTTGGTGGCTTTCAACCGTCCATAGCAGATCTCAGCCTGGTTTGTGAACTTATGCAACTTGAGGTTTTGGATGAGAAGGATCGCGATCGTATATTGTCTCCATACAAGAAAGTTCTACGGTGGATTGAGGATACAAGAACTGCAACAAATCCCCATTTTGAAGAAATGCATAATATCCTTTATAGAGCTAAAAAGAAATTCCAACAGGAGCGTTCAAGAGTAGCTGAAACTGGGACTGAGCCAAGCAACAAGAAGGGGGGACATTCTAGGATGTGA 1443 0.4227 MKLKVYADRMSQPSRAVLIFCKVNGIDFEEIKVELSKRHQLSPEFQAINPFRKVPAIVDGRFKLFESHAILIYLASAFPGVPDHWYPADVSRRARIHSVLDWHHLNLRRGAAAYVLNTVLAPLLGLPLNQQAAAEAEKTLISSLSKIENIWLKGNGKYLLGGLQPSIADLSLVCEIMQLELLDENDRNRILGPHKKVQQWIESTRNATRPHFDQVHNVLFKLKMKLSVQQSSQAGIMESRMKAPLTSKVLKRFNRIDFEEIKVELFRREHLSPEFTEVNPMQKVPAIVHGTFNLFESHAILIYLASAFPGIADHWYPTDLFKRAKINSVLDWHHSNLRHGAVNYVINTVLGPALGRPLNPKAAAEAEKVLLSSLSKLEDFWLNGDGRFLLGGFQPSIADLSLVCELMQLEVLDEKDRDRILSPYKKVLRWIEDTRTATNPHFEEMHNILYRAKKKFQQERSRVAETGTEPSNKKGGHSRM. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06630 480 MobiDBLite consensus disorder prediction 459 480 - -
Seca11g06630 480 Pfam Glutathione S-transferase, C-terminal domain 362 432 - -
Seca11g06630 480 SUPERFAMILY GST C-terminal domain-like 313 436 IPR036282 -
Seca11g06630 480 Gene3D - 82 246 - -
Seca11g06630 480 Gene3D - 312 468 - -
Seca11g06630 480 CDD GST_C_Theta 92 222 IPR040077 -
Seca11g06630 480 SFLD Main (cytGST) 1 229 - -
Seca11g06630 480 SFLD Main (cytGST) 255 435 - -
Seca11g06630 480 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 256 312 IPR004045 -
Seca11g06630 480 FunFam Glutathione S-transferase theta-1 83 231 - -
Seca11g06630 480 CDD GST_C_Theta 322 451 IPR040077 -
Seca11g06630 480 Gene3D Glutaredoxin 247 311 - -
Seca11g06630 480 Gene3D Glutaredoxin 1 81 - -
Seca11g06630 480 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
Seca11g06630 480 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 319 456 IPR010987 -
Seca11g06630 480 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Seca11g06630 480 CDD GST_N_Theta 3 78 IPR040075 -
Seca11g06630 480 SFLD Main.4: Theta-like 1 229 - -
Seca11g06630 480 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 245 IPR010987 -
Seca11g06630 480 FunFam Glutathione S-transferase theta-1 313 461 - -
Seca11g06630 480 SUPERFAMILY Thioredoxin-like 253 311 IPR036249 -
Seca11g06630 480 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Seca11g06630 480 Pfam Glutathione S-transferase, N-terminal domain 253 305 IPR004045 -
Seca11g06630 480 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 234 IPR043377 -
Seca11g06630 480 SUPERFAMILY GST C-terminal domain-like 83 217 IPR036282 -
Seca11g06630 480 SFLD Glutathione Transferase (cytosolic) 255 435 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06630 Seca-Chr11 166694998 166706945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06630 236 468 Glutathione S-transferase Gene Family AT5G41210 62.393 1.39e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06630 K00799 - gmx:547979 426.787