Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g06630 | ATGAAGCTCAAAGTATATGCAGACCGTATGTCCCAGCCATCCCGTGCGGTTCTTATCTTTTGCAAAGTAAATGGAATAGATTTTGAGGAGATCAAAGTGGAACTATCCAAACGTCACCAGTTATCTCCTGAATTTCAAGCGATTAACCCTTTCAGGAAAGTCCCTGCTATTGTTGATGGAAGGTTCAAACTATTTGAGAGTCATGCTATTCTTATCTACCTTGCTTCTGCCTTTCCAGGAGTTCCAGACCATTGGTACCCAGCTGATGTTTCTAGGAGAGCTAGAATACATTCTGTGTTAGATTGGCATCACCTGAATTTGCGCCGTGGAGCAGCCGCATATGTTCTAAATACTGTACTAGCTCCATTATTGGGTCTGCCACTAAACCAACAAGCAGCTGCTGAAGCCGAGAAAACTTTGATATCATCTCTGTCCAAAATAGAGAACATTTGGCTTAAGGGGAACGGAAAGTACTTGCTTGGTGGCTTGCAACCGTCCATAGCAGATCTCAGTCTGGTTTGCGAAATAATGCAATTAGAGCTTTTAGATGAGAATGATCGTAATCGTATTCTTGGCCCGCACAAGAAAGTTCAGCAGTGGATTGAGAGCACAAGAAATGCAACGAGGCCTCATTTTGATCAAGTTCATAATGTCCTTTTTAAGCTCAAAATGAAGCTTTCAGTGCAGCAATCTAGTCAGGCAGGCATAATGGAATCTAGGATGAAAGCCCCACTAACTTCAAAGGTTTTGAAAAGGTTCAACCGAATTGACTTCGAGGAGATTAAAGTTGAACTTTTCAGACGTGAGCATCTGTCTCCTGAATTCACAGAAGTAAACCCCATGCAGAAAGTTCCAGCTATTGTTCATGGAACCTTCAATCTCTTCGAGAGCCATGCAATCCTTATCTATCTTGCTTCTGCTTTTCCTGGAATTGCTGACCATTGGTATCCAACTGATCTTTTCAAAAGAGCCAAAATTAACTCAGTATTGGATTGGCATCACTCTAATTTACGACACGGAGCAGTGAACTATGTAATAAATACTGTATTAGGACCTGCACTTGGCCGTCCTCTGAATCCAAAAGCAGCTGCCGAAGCAGAGAAAGTTTTACTATCTTCTTTATCAAAACTAGAGGACTTTTGGCTCAATGGAGATGGGCGCTTCCTGCTTGGTGGCTTTCAACCGTCCATAGCAGATCTCAGCCTGGTTTGTGAACTTATGCAACTTGAGGTTTTGGATGAGAAGGATCGCGATCGTATATTGTCTCCATACAAGAAAGTTCTACGGTGGATTGAGGATACAAGAACTGCAACAAATCCCCATTTTGAAGAAATGCATAATATCCTTTATAGAGCTAAAAAGAAATTCCAACAGGAGCGTTCAAGAGTAGCTGAAACTGGGACTGAGCCAAGCAACAAGAAGGGGGGACATTCTAGGATGTGA | 1443 | 0.4227 | MKLKVYADRMSQPSRAVLIFCKVNGIDFEEIKVELSKRHQLSPEFQAINPFRKVPAIVDGRFKLFESHAILIYLASAFPGVPDHWYPADVSRRARIHSVLDWHHLNLRRGAAAYVLNTVLAPLLGLPLNQQAAAEAEKTLISSLSKIENIWLKGNGKYLLGGLQPSIADLSLVCEIMQLELLDENDRNRILGPHKKVQQWIESTRNATRPHFDQVHNVLFKLKMKLSVQQSSQAGIMESRMKAPLTSKVLKRFNRIDFEEIKVELFRREHLSPEFTEVNPMQKVPAIVHGTFNLFESHAILIYLASAFPGIADHWYPTDLFKRAKINSVLDWHHSNLRHGAVNYVINTVLGPALGRPLNPKAAAEAEKVLLSSLSKLEDFWLNGDGRFLLGGFQPSIADLSLVCELMQLEVLDEKDRDRILSPYKKVLRWIEDTRTATNPHFEEMHNILYRAKKKFQQERSRVAETGTEPSNKKGGHSRM. | 481 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g06630 | 480 | MobiDBLite | consensus disorder prediction | 459 | 480 | - | - | |
Seca11g06630 | 480 | Pfam | Glutathione S-transferase, C-terminal domain | 362 | 432 | - | - | |
Seca11g06630 | 480 | SUPERFAMILY | GST C-terminal domain-like | 313 | 436 | IPR036282 | - | |
Seca11g06630 | 480 | Gene3D | - | 82 | 246 | - | - | |
Seca11g06630 | 480 | Gene3D | - | 312 | 468 | - | - | |
Seca11g06630 | 480 | CDD | GST_C_Theta | 92 | 222 | IPR040077 | - | |
Seca11g06630 | 480 | SFLD | Main (cytGST) | 1 | 229 | - | - | |
Seca11g06630 | 480 | SFLD | Main (cytGST) | 255 | 435 | - | - | |
Seca11g06630 | 480 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 256 | 312 | IPR004045 | - | |
Seca11g06630 | 480 | FunFam | Glutathione S-transferase theta-1 | 83 | 231 | - | - | |
Seca11g06630 | 480 | CDD | GST_C_Theta | 322 | 451 | IPR040077 | - | |
Seca11g06630 | 480 | Gene3D | Glutaredoxin | 247 | 311 | - | - | |
Seca11g06630 | 480 | Gene3D | Glutaredoxin | 1 | 81 | - | - | |
Seca11g06630 | 480 | SUPERFAMILY | Thioredoxin-like | 1 | 87 | IPR036249 | - | |
Seca11g06630 | 480 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 319 | 456 | IPR010987 | - | |
Seca11g06630 | 480 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Seca11g06630 | 480 | CDD | GST_N_Theta | 3 | 78 | IPR040075 | - | |
Seca11g06630 | 480 | SFLD | Main.4: Theta-like | 1 | 229 | - | - | |
Seca11g06630 | 480 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 245 | IPR010987 | - | |
Seca11g06630 | 480 | FunFam | Glutathione S-transferase theta-1 | 313 | 461 | - | - | |
Seca11g06630 | 480 | SUPERFAMILY | Thioredoxin-like | 253 | 311 | IPR036249 | - | |
Seca11g06630 | 480 | Pfam | Glutathione S-transferase, N-terminal domain | 1 | 75 | IPR004045 | - | |
Seca11g06630 | 480 | Pfam | Glutathione S-transferase, N-terminal domain | 253 | 305 | IPR004045 | - | |
Seca11g06630 | 480 | PANTHER | GLUTATHIONE S-TRANSFERASE T1-RELATED | 1 | 234 | IPR043377 | - | |
Seca11g06630 | 480 | SUPERFAMILY | GST C-terminal domain-like | 83 | 217 | IPR036282 | - | |
Seca11g06630 | 480 | SFLD | Glutathione Transferase (cytosolic) | 255 | 435 | IPR040079 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g06630 | Seca-Chr11 | 166694998 | 166706945 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g06630 | 236 | 468 | Glutathione S-transferase Gene Family | AT5G41210 | 62.393 | 1.39e-102 | 305 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g06630 | K00799 | - | gmx:547979 | 426.787 |