Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06626 ATGAAGTTATGTACTCCATTGTTGTTTCTCTGTTTGGTTTCCACGCTCTCTTTTGTTGCTTCTGATAAAGGGCTCTCAAATGAAGTTTTGGCCCTTACAACTTTCAAAGAAGCTGTGTATGAAGATCCACATCATGTTTTGTCCAATTGGAATACTCTGGAGTCAGATCCTTGTGACTGGAATGGTGTTTCATGCACTGGCACTAGAGATCATGTCATCAAGCTAAACATATCAGGGGCATTATTAAGAGGGTTTCTTGCTCCAGAATTTGGGAAAATCTCCTACTTGGAAGCATTGATCTTGCATGGCAACAATCTCATTGGAACAATACCGAAAGAATTGGGCATGTTAAAATCTCTTAAGGTGTTGGATTTGGGAAAGAATCAGTTATCAGGGCCAATTCCTCCAGAAATTGGAAATATGACTCAAATTGTTAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGTTACCTCCAGAGCTAGGAAATTTGAAGTACCTTCAAGAACTTCGGTTGGATAGGAATAAGCTTCAAGGGACTGTTCCTGCTGGTGGCAGTTCAAATTTTGATTCAAATATGCATGGAATGTATGCATCAAATGCAAATTTAACTGGCTTCTGTCGTTCATCTCAACAACTATTTGCAGATTTTTCATACAACTTTTTTGTTGGTAGCATACCTAAGTGCTTGGAGCATCTTCCAAGATCAAGCTTTCAAGGGAATTGCCTCCAGGTCAAAGACATCAAACAGAGAACTTCTGTGCAATGTGTGAACTATTATTTCATAGCTGGTGCTTCACCTGCTCAGAGCCATCCAGTAGTGAACCAAAAGCACCAACCTGCTGCTGAACACATGTCCAAGCATCAAGGAGCATCAAAACCTGCTTGGCTTTTGCCTCTAGAAATAGTGACTGGAACCATGGTTGGTTCCCTCTTTCTGATTGCTATTCTCACTGCTTTCCATAGATGCAACAACAAATCATCTATCATTATTCCTTGGAAAAAATCTGCAAGTGAGAAAGAGAATATTGCAGTATATATAGACTCTGAGATGTTGAAGGATGTGATGAGGTATAGCAGACAAGACCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGTCCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAAGAGAATTGGACAGGACACCTTGAACTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGCTAAATCATGATAATACAGGAAAGCTACTAGGCTATTGTAGAGAGAGTACCCCATTTACAAGGATGCTTGTTTTTGAGTATGCATCAAATGGGACACTTTATGAGCACCTACATTATGAAGAAGGGTGCCAGTTATCTTGGACACGGCGAATGAAAATCATCATAGGCATTGCACGTGGACTAAAGTATTTGCACACTGAAGTTGAGCCACCATTCACTATCTCAGAGTTGAATTCCAATGCTGTTTACCTTACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAAAGCTCTGGTTCTGTTGGCAGCCAAGGTTCTGTTTGTGTTCTTCCAAACTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACGTTTATGCATTTGCAGTACTTTTACTGGAGATAATCAGTGGAAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCCAGGGACTACCTTGAAATCCCAGAAGTAATGTCATATGTGGTGGATCCTGAATTGAAACATTTTAGATATGAGGACCTCAAAGTTATATGTGAGGTAGTAAGTCTTTGTATCAGTCCTGATCCCACTGTCCGTCCATCAATGCAAGAATTATGCAGTATGCTGGAGAGCAGAATTGACACATCAATAAGTGTGGACCTCAAGGCATCATCTTTGGCTTGGGCTGAACTAGCACTTTCATCATAA 2004 0.4112 MKLCTPLLFLCLVSTLSFVASDKGLSNEVLALTTFKEAVYEDPHHVLSNWNTLESDPCDWNGVSCTGTRDHVIKLNISGALLRGFLAPEFGKISYLEALILHGNNLIGTIPKELGMLKSLKVLDLGKNQLSGPIPPEIGNMTQIVKINLQSNGLTGRLPPELGNLKYLQELRLDRNKLQGTVPAGGSSNFDSNMHGMYASNANLTGFCRSSQQLFADFSYNFFVGSIPKCLEHLPRSSFQGNCLQVKDIKQRTSVQCVNYYFIAGASPAQSHPVVNQKHQPAAEHMSKHQGASKPAWLLPLEIVTGTMVGSLFLIAILTAFHRCNNKSSIIIPWKKSASEKENIAVYIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEENWTGHLELYFQREVADLARLNHDNTGKLLGYCRESTPFTRMLVFEYASNGTLYEHLHYEEGCQLSWTRRMKIIIGIARGLKYLHTEVEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKSSGSVGSQGSVCVLPNSLEARHLDTKGNVYAFAVLLLEIISGRPPYCKDKGYLVDWARDYLEIPEVMSYVVDPELKHFRYEDLKVICEVVSLCISPDPTVRPSMQELCSMLESRIDTSISVDLKASSLAWAELALSS. 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06626 667 PANTHER PROTEIN MALE DISCOVERER 2 11 665 - -
Seca11g06626 667 ProSiteProfiles Protein kinase domain profile. 369 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g06626 667 Gene3D Ribonuclease Inhibitor 25 213 IPR032675 -
Seca11g06626 667 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Seca11g06626 667 Gene3D Transferase(Phosphotransferase) domain 1 451 656 - -
Seca11g06626 667 SUPERFAMILY Protein kinase-like (PK-like) 349 642 IPR011009 -
Seca11g06626 667 SUPERFAMILY L domain-like 27 235 - -
Seca11g06626 667 Pfam Protein tyrosine and serine/threonine kinase 372 641 IPR001245 GO:0004672|GO:0006468
Seca11g06626 667 FunFam Inactive receptor-like serine/threonine-protein kinase 343 450 - -
Seca11g06626 667 Gene3D Phosphorylase Kinase; domain 1 342 450 - -
Seca11g06626 667 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06626 Seca-Chr11 166675816 166680591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06626 7 641 Receptor kinase-like Gene Family AT1G25320 28.125 1.18e-57 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Seca11g06626 PK_Tyr_Ser-Thr 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06626 - - gmx:100779744 1111.67