Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06603 ATGGGCAATATTGGGGATTCTCGAGCAATCATGGGATCCAAGGACAGCAATGACGCCATGGTGGCAGTTCAATTGACTGTTGATTTGAAGCATGATTTGCCAAGAGAAGCAGAAAGAATTAAGCGTTGCAAGGGTAGGGTATTTGCACTGCAAGATGAGCCAGAAGTGCCTAGGGTATGGTTGCCTTTTGATGATGCTCCAGGATTAGCAACGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACAGACAGAGATTGA 303 0.4521 MGNIGDSRAIMGSKDSNDAMVAVQLTVDLKHDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLATARAFGDFCLKEYGVISIPEFSHRLLTDRD. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06603 100 ProSiteProfiles PPM-type phosphatase domain profile. 1 100 IPR001932 -
Seca11g06603 100 Pfam Protein phosphatase 2C 2 99 IPR001932 -
Seca11g06603 100 Gene3D - 1 100 IPR036457 -
Seca11g06603 100 SUPERFAMILY PP2C-like 2 98 IPR036457 -
Seca11g06603 100 PANTHER PROTEIN PHOSPHATASE 2 100 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06603 Seca-Chr11 166493947 166494342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06603 1 100 PP2C-type Phosphatase Gene Family AT1G03590 90.000 1.01e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06603 - - thj:104826028 195.282