Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06582 ATGGCAAACAAGCTGGATGTAAAGCTAGGAGAACCAACTCTGGTTCTGCCTGCAGAAGAAACGAAAAAGGGTCTCTACTTCCTTTCAAATCTAGACCAGAATATAGCATATCCAGTTCGTACAGTTTACTTTTATAAGTCAGCTTCTAGAGGCAATGAGGATGTTGCACAAGTCATCAAGGATTCCTTATCAAAGATTCTTGTTCACTATTTCCCAATGGCGGGTAGATTGACAATCAGCTCAGAAGGGAAACTGATAGTTGACTGCACAGAGGAGGGTGTTGTATTTGTTGAGGCTGAAGCAAACTGTATGATAGAGGATTTGGGAGATGTGTCAAAGCCTAAACTTGAAACTCTTGCAAAATTGGTCTATGATATCCCTGGTGCAAGGAACATACTTGAGATACCTCCTCTGTTAATTCAGGTGACAAAGTTTAAATGTGGAGGATTTGTTTTGGGGGTAAATGTGAACCATTGCATGAATGATGGTATAAGTGCTATGCAATTTGTGAACTCATGGGGTGAGATAGCTAGAGGCATAGACTTGAAAATTCAACCATTTATGGATAGAACCATACTCAAAGCACGCAACCCTCCTAAAATAGAGTTCACACACCATGAATTTGCTACAATCGAAGATGTATCAGGTACTGACAAACTTTATGAGGAAGAGTTGCTCTATGGGTCTTTTTGTTTTGATCAGGACAAGCTGGAGATGCTCAAGAAAAAGGCCACAGAAGATGGTGTTATGAAAAAGTGTTCCACTTATGAAGCCCTATCGGCTTTTGTGTGGAGAGCTAGAACTGAAGCCTTAAGGATGCATCCTAATCAACAAGTGAAGCATTATCATGTGATGGAAGGTCTAGATTTGTGTCACCAATACCAAAAGGGTACTTTGGCAATGCTATTGTGTTGTCAAATGCTCTGTGCAAGGCAGGTGAATTGTTGA 948 0.4061 MANKLDVKLGEPTLVLPAEETKKGLYFLSNLDQNIAYPVRTVYFYKSASRGNEDVAQVIKDSLSKILVHYFPMAGRLTISSEGKLIVDCTEEGVVFVEAEANCMIEDLGDVSKPKLETLAKLVYDIPGARNILEIPPLLIQVTKFKCGGFVLGVNVNHCMNDGISAMQFVNSWGEIARGIDLKIQPFMDRTILKARNPPKIEFTHHEFATIEDVSGTDKLYEEELLYGSFCFDQDKLEMLKKKATEDGVMKKCSTYEALSAFVWRARTEALRMHPNQQVKHYHVMEGLDLCHQYQKGTLAMLLCCQMLCARQVNC. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06582 315 Gene3D - 217 290 IPR023213 -
Seca11g06582 315 Gene3D - 1 210 IPR023213 -
Seca11g06582 315 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 282 - -
Seca11g06582 315 FunFam Spermidine hydroxycinnamoyl transferase 5 208 - -
Seca11g06582 315 Pfam Transferase family 8 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06582 Seca-Chr11 166293351 166294442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06582 5 287 Monolignol Biosynthesis Gene Families AT5G48930 37.631 3.97e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06582 K15400 - gmx:100775546 446.817