Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06581 ATGGATTTTGTGAAGAAGTGTAAGAAGGTATGGGGAATTAGCAGCAGCAAGAGATTGCACCCTGCAGAAGACAGTGGCAGCTACGGCAAATTATCATCAAAGAAAAAGGCTCCGCATGGTTGTCTTTCGGTCTACGTTGGGCCAGAGAGACAGAGATTCGTAATAAAGATCAAAATCGCGAACCACCCTTTGTTCAAGACGCTTTTAGACGCTGCTGAGAAAGAGTATGGATATACAAACGATGGTCCTCTTTGGCTTCCTTGCGACGTTGATTTCTTCTGTGAGGCACTGGCGGAGATGGAAAATACTGAGGAGGATATGAATTCTGTAGGTTGCGCCTTTCCCATAGGTCACAGTCACAGACACTCTCCATTATCTAATTACAAAACTACTTGTGCTGCTCATTACCAGCTTTTGGGATAA 423 0.4444 MDFVKKCKKVWGISSSKRLHPAEDSGSYGKLSSKKKAPHGCLSVYVGPERQRFVIKIKIANHPLFKTLLDAAEKEYGYTNDGPLWLPCDVDFFCEALAEMENTEEDMNSVGCAFPIGHSHRHSPLSNYKTTCAAHYQLLG. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06581 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 95 IPR003676 GO:0009733
Seca11g06581 140 Pfam Auxin responsive protein 17 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06581 Seca-Chr11 166284260 166284682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06581 37 107 Calmodulin-binding Proteins AT5G20810 46.479 2.37e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06581 K14488 - gmx:102667331 157.532