Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06569 ATGGATGATGGCCGCCAACATGAAAACAGTAGGCATAAAATGGAATACTATAGAGGAGCACATTCCCTGTGGAATACAGATCCTCAGCATCAAGTAAAGGAGCCAAATGCGTTAGTTATGAATAAGAAAATTAGGTCCATTATGGCGGAAAGACAGGCTGCCATTCTAGAACTTGAACTAGAGGCTGCCATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATTTAGCCATTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGTGCTGTTGGAACGGGATAATGCTCTTGCTGCCCTTCAAAATCGGATAAATGCTGTCAACTTCCCATTCAATGGCGGAGTTCAACGTGGATCAAAGCGGATGCATCATTGTTCAAACCATCTATCCGACATGACAGAAGTTGCATACAGCACAAAGGATATGATAATAAGGGATGCCTCCCCAGTAACTGTTATAACTGCTGAAGCTGTCAAATCTCATCAAACTAAGAGAACAAAGGAGAACAAGGTAACTAATTCTAAGGCATCAAAGTCACCTAGTAAAGTAAAGAAAATTGGTGAGGATTTAAATAGGAAGGCCTCTTCTGAAGGGACTAAGATAAGATCTGAGTGGGATAGGCAGGACGTTGGCTTGAATTTGGTTGCATTTGATGAAACAATCATGCCGGTACCAGTTTGCACATGCACTGGAGTCGCACGACAGTGCTACAAATGGGGCAATGGTGGATGGCAGTCATCTTGTTGTACCACCACATTGTCAGTGTATCCATTGCCACAGCTTCCAAACAAGCGTCATGCCCGCATTGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTTCTCAGTAAGCTGGCATCAGAAGGCCATGATTTATCTATACCATTGGATCTTAAGAACTACTGGGCCAGACATGGAACAAATCGCTACATTACTATCAAGTAG 954 0.4371 MDDGRQHENSRHKMEYYRGAHSLWNTDPQHQVKEPNALVMNKKIRSIMAERQAAILELELEAAISEKNEALAARDLAIRQRDEALAQRDNVLLERDNALAALQNRINAVNFPFNGGVQRGSKRMHHCSNHLSDMTEVAYSTKDMIIRDASPVTVITAEAVKSHQTKRTKENKVTNSKASKSPSKVKKIGEDLNRKASSEGTKIRSEWDRQDVGLNLVAFDETIMPVPVCTCTGVARQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSKLASEGHDLSIPLDLKNYWARHGTNRYITIK. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06569 317 SMART GAGA_bind_2 1 317 IPR010409 -
Seca11g06569 317 Pfam GAGA binding protein-like family 1 317 IPR010409 -
Seca11g06569 317 PANTHER - 11 317 IPR010409 -
Seca11g06569 317 MobiDBLite consensus disorder prediction 183 201 - -
Seca11g06569 317 MobiDBLite consensus disorder prediction 162 201 - -
Seca11g06569 317 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06569 Seca-Chr11 166148225 166153834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06569 1 317 BBR or BPC Transcription factor family AT2G21240 57.680 3.14e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Seca11g06569 GAGA_bind 2.7e-99 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06569 - - gmx:100813103 560.066