Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06514 ATGGCTTCTTCTATTGTTCGTAGGACCATCACCCACAGATTGAAGCTCCCATTTTCTTCTTCTCGGTGCTTGAATCATCACTTTGTGTCTCGCCATAGCTCAATCCACGCTGTTGAAGATGCCGTTCCCTTCCACAGCCAAGCCGTTGGGGGTGGTGGTGCAGGACTCCCATCTTATATGCGTGGAGCTGTCTATTGGGAACCCAACAAGCCTCTCACCATCGAGGAATTCCACATTCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACCAAAGCTTGTGGAGTATGCCACTCTGATCTACATGTTCTGAAAGGTGAAATTCCATTTTCTAGTCCTTGCGTTTTGGGGCATGAGATTACTGGCGAAGTTGTTGAACATGGATCACTCTCTGATGGAAAAATCATAGAAAGGCTTCCTGTTGGATCTCGAGTTGTTGGGACCTTCATCATGCCTTGTGGCAACTGCTCCTATTGTTCAAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCTTATAACCGAGCAAAAGGAACCCTCTATGATGGTGAAACACGACTCTTTCTTCGAGGCAGTGGAAAGCCGGTATACATGTATAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCAGCAAATGCATTGACTGTATTACCAGACTCATTGCCATATACCGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCTGAAGTGCGTCCGGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCTTCCGATATTATTGCTGTTGATGTCCAGGATGAAAAGCTACAGAAAGCGAAGAAATTTGGTGCTACTCACACTATAAATTCAGCAAAGGAGGATCCGATTGAGAAGATAATTGTATATGCATATTTCCCTTTTGCCTCATCGTTTAATATCTAG 975 0.4533 MASSIVRRTITHRLKLPFSSSRCLNHHFVSRHSSIHAVEDAVPFHSQAVGGGGAGLPSYMRGAVYWEPNKPLTIEEFHIPRPKAGEVLIKTKACGVCHSDLHVLKGEIPFSSPCVLGHEITGEVVEHGSLSDGKIIERLPVGSRVVGTFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRGSGKPVYMYSMGGLAEYCVVPANALTVLPDSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKKFGATHTINSAKEDPIEKIIVYAYFPFASSFNI. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06514 324 Gene3D - 64 236 - -
Seca11g06514 324 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 117 131 IPR002328 GO:0008270|GO:0016491
Seca11g06514 324 SUPERFAMILY GroES-like 55 263 IPR011032 -
Seca11g06514 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 226 310 IPR036291 -
Seca11g06514 324 Gene3D - 237 311 - -
Seca11g06514 324 Pfam Zinc-binding dehydrogenase 260 310 IPR013149 -
Seca11g06514 324 Pfam Alcohol dehydrogenase GroES-like domain 85 215 IPR013154 -
Seca11g06514 324 FunFam Alcohol dehydrogenase (Zinc) 64 249 - -
Seca11g06514 324 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 59 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06514 Seca-Chr11 165550005 165554782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06514 77 295 Monolignol Biosynthesis Gene Families AT4G37990 28.889 2.37e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06514 - - gmx:100775182 518.464