Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06508 ATGTCATCTTTAGACGTTGATTGCAAGCCAAGAGTTGGTATGGAATTTGATAGTGTAGAGACAGCTTGGCAATTTTGGCTTAGATATGGGGCACAAACTGGCTTTGGAGTTCGATTACGATACAGAAACAAAAGAAAGCAAGATGGTGCTATTACTTCATGTAGATTTGTTTGTTGTAAGGAGGGGGTGCGAACAACAAATGGTGCTTTGGTTAGCAACCATAAAGCTCCGACTAGAACTGATTGCAAAGCAAGGATTTCACTTATATTAAAGAATGAAAAACTTGTCCTACATGAGTTTGTAGAGGACCATAACCACCCTCTACAACTTCCAGAGACAACACACGTGCTTGCATCACAAAGAAAAATAAGTGAAGTCCAAGCATATGAGATTGATCTAGCGAATGACTCTGGATTAAAGCAAAAAACAACATTTCAGCTTATGAGCACACATGCAGGGCATAGGTCTAATCTTGGATATACATGGTTGGATGTAAAAAATTACCCCAATGCAAGAAGACAAGGAAGCATGGTGTATGGTGAAGTTGGATGTCTTTTGCAATATTTTCAACGACAATTAAAGGAAAACCCATCTTTCTTCCATGCATTCCAAATGGATATGGATGAACAAATCACAAATGTATTCTGGGCTGATGCAAAAATGGTGTTGGATTATGGGTATTTCGTTGATGTTATGTCATTGGATACTACATATTGTACAAATCGTGCAAATAGACCACTTGCTTTGTTTTCTGGTTTCAACCATTATAGGGGTTCAGTCATTTTTGGGGCAACATTATTGTATGACGAAACAATTGAATCATTTAAATGGTTGTTTGAGACGTTCTTACAAGCACACAACCAGAAAAAACCTCAAACCATCTTTACTGACCAAGACTAG 900 0.3789 MSSLDVDCKPRVGMEFDSVETAWQFWLRYGAQTGFGVRLRYRNKRKQDGAITSCRFVCCKEGVRTTNGALVSNHKAPTRTDCKARISLILKNEKLVLHEFVEDHNHPLQLPETTHVLASQRKISEVQAYEIDLANDSGLKQKTTFQLMSTHAGHRSNLGYTWLDVKNYPNARRQGSMVYGEVGCLLQYFQRQLKENPSFFHAFQMDMDEQITNVFWADAKMVLDYGYFVDVMSLDTTYCTNRANRPLALFSGFNHYRGSVIFGATLLYDETIESFKWLFETFLQAHNQKKPQTIFTDQD. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06508 299 Pfam MULE transposase domain 231 299 IPR018289 -
Seca11g06508 299 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 299 IPR031052 GO:0006355
Seca11g06508 299 Pfam FAR1 DNA-binding domain 24 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06508 Seca-Chr11 165494152 165495051 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g06508 FAR1 2.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06508 - - aprc:113850480 437.187