Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06500 ATGAAGGTAAAGAAGGGTTGGCTAGCTGTTCAAGTGGGTTTGGAGGAACAGCAATTCGAAGAGGAAGATGAAGATAGCTCTCAAAGATTTATGATCCCAATTTGGTATCTTTATCATCCCCTTTTCAAGCGCCTTCTGGACAGAGCTTACGAGGTTTATGGCTACAACACCGATGGTCCCCTGAAACTGCCCTGTTCCGTTGATGACTTTCTTCATCTACGCTGGCGAATTGAGAAAGAGTCGACACCCCACCACCATAATCATCACCACAAACACCAACACCATCATCAACTTCCTCACGCCTTGTATTTCCACTCTTGTTAA 324 0.4506 MKVKKGWLAVQVGLEEQQFEEEDEDSSQRFMIPIWYLYHPLFKRLLDRAYEVYGYNTDGPLKLPCSVDDFLHLRWRIEKESTPHHHNHHHKHQHHHQLPHALYFHSC. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06500 107 Pfam Auxin responsive protein 3 76 IPR003676 GO:0009733
Seca11g06500 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 73 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06500 Seca-Chr11 165390915 165391238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06500 3 78 Calmodulin-binding Proteins AT3G43120 43.421 3.02e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06500 K14488 - gmx:100306557 156.377