Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06489 ATGTCACACATTGCTTTAACTGCATCAGCCACAGCAACCGTCGTCGCTTTCCACCGCGGAGCAAAACAATGGAGCGCGCTATTTCCGAGAAGCATGGGAACTAATCAACCCTCCTTGTTCGCAAACTCTCCCAGGAAACGGTTGCAATTGCGGTTTTTAGCTACAGGGAAAAATGGCGGCAATGGAGGTGTTGCGGAGGAGATATCCGAAACCGAAAAAGCGCAAACGAATTTCGTGTGGCCTGATAACAAGAAGCCTAGGGTGTGCATATTAGGTGGCGGATTCGGTGGTTTGTATACTGCTTTGAGGTTGGAATCACTGGAGTGGCCTGACGACAAAAAACCACAGATAGCTCTTGTCGACCAGTCTGATCGTTTTGTTTTCAAGCCAATGTTGTATGAGCTTCTATCTGGTGAGGTGGACGAATGGGAAATAGCTCCTCGTTTCTCAGATTTGCTGGCAAACACTAGTGTGCAGTTTTTGAAAGATAGAGTAAAACTTTTGCATCCCTCTGATCATTGGGGAATGAATGGATCCAAAGCATCTACTTGTGGAGGAACTGTTCATCTTGAAAGTGGCCTTCATATTGAATATGACTGGCTGGTTCTTGCATTGGGAGCTGAATCTAAAGTGGATGTTGTACCAGGAGCGGCAGAATTTGCAATTCCTTTCTCCACGTTAGAGGATGCACGTAAAGTTAACAATAGATTAACAACATTAGAGAGAAAGACCTTTGGTAAGGACCTCCAAATTAGTGTGGCCATTGTTGGTTGTGGTTACTCTGGAGTTGAATTAGCTGCAACAGTAGCAGAGCGATTACAGAATAGAGGAATTGTGAGAGCAATTAATGTTGAAACAATGATCTGCCCAAATGCTCCACCTGGCAACAGGGAAGCTGCACTGAAAGTAAGTTGCTTAGAGTTTAAATTTTATGCTTACTGGAACTTGAATATCTGTTTTGTACAACTTAGAATGACATGTGCAATTAAGTGA 993 0.4371 MSHIALTASATATVVAFHRGAKQWSALFPRSMGTNQPSLFANSPRKRLQLRFLATGKNGGNGGVAEEISETEKAQTNFVWPDNKKPRVCILGGGFGGLYTALRLESLEWPDDKKPQIALVDQSDRFVFKPMLYELLSGEVDEWEIAPRFSDLLANTSVQFLKDRVKLLHPSDHWGMNGSKASTCGGTVHLESGLHIEYDWLVLALGAESKVDVVPGAAEFAIPFSTLEDARKVNNRLTTLERKTFGKDLQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVETMICPNAPPGNREAALKVSCLEFKFYAYWNLNICFVQLRMTCAIK. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06489 330 Gene3D - 83 304 - -
Seca11g06489 330 Pfam Pyridine nucleotide-disulphide oxidoreductase 87 296 IPR023753 GO:0016491
Seca11g06489 330 PANTHER APOPTOSIS-INDUCING FACTOR 1 19 303 - -
Seca11g06489 330 SUPERFAMILY FAD/NAD(P)-binding domain 85 274 IPR036188 -
Seca11g06489 330 PRINTS FAD-dependent pyridine nucleotide reductase signature 88 107 - -
Seca11g06489 330 PRINTS FAD-dependent pyridine nucleotide reductase signature 252 270 - -
Seca11g06489 330 PRINTS FAD-dependent pyridine nucleotide reductase signature 198 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06489 Seca-Chr11 165289463 165291835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06489 77 235 Chloroplast and Mitochondria Gene Families AT4G21490 24.390 2.47e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06489 K17872 - gmx:100795521 516.538