Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06488 ATGTCTGTGCCTCCAAGCAGTGCCTTGTACCTTTCCCAGGCCACTGAACACAGTAATTTTGAGGGTGAAAGCTTCCACAAGTTTTTTGATTGTTGGCTTGCTGAGCAAAACCAACATTTGAATGACCTTTTAGAAGCTGAATCAAGTCAGGTTCCAAATGAGAGAGCACAGTCACTGATTGATAAGGTGCTTGAGCATTATGAATCATACTACAAGGCCAAGTCAAGGTGGGCAAAGCATGATGTGCTTGCCATGTTGTCCCCATCTTGGAGAAGCTCCTTAGAAGAGGCTTTTCTTTGGATTGGTGGGTGGAGACCAAGTATGGCATTCCACTTGCTATATTCCAAATCTAGTTTGCAATTTGAGGCCAGATTGAATGAACTGATTCAGGGGATAAGAACATGTGACATGGGAGATTTGTCAGCAGCTCAACTTACTCAGTTGGATGATATGCAGAGGAGGGCCATCAGAGAGGAGAGGGGAATCACAGATATGATGGCAAAGCAGCAGGAAACAGTGGCTGATGCTCCAATGGTGAAGCTATCACAGGTTGTTTCTGAGATGATTAGAGCTAATGAAGGTGGAGAGAGTGAGAATAAGGAATTAGAAGACAAAATTGAGTCAACTCTGGAACCAAAGGTGGAAGGTCTGGAGAAGGTATTGCAGAAAGCTGATGATCTAAGGCTGAGAACATTGCAGGGCATTGTCCATATTCTGAGTCCACAGCAGGCTATCCACTTCTTAATTGCTGCTGCAGAGCTGCACCTGAGGCTGCATGAATGGGGCAAGAAGAAGGATGCAAGAAGGGCAAATGAAGATAATGGTAGCCACAATTCATCAAGATAA 846 0.4456 MSVPPSSALYLSQATEHSNFEGESFHKFFDCWLAEQNQHLNDLLEAESSQVPNERAQSLIDKVLEHYESYYKAKSRWAKHDVLAMLSPSWRSSLEEAFLWIGGWRPSMAFHLLYSKSSLQFEARLNELIQGIRTCDMGDLSAAQLTQLDDMQRRAIREERGITDMMAKQQETVADAPMVKLSQVVSEMIRANEGGESENKELEDKIESTLEPKVEGLEKVLQKADDLRLRTLQGIVHILSPQQAIHFLIAAAELHLRLHEWGKKKDARRANEDNGSHNSSR. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06488 281 ProSiteProfiles DOG1 domain profile. 22 268 IPR025422 GO:0006351|GO:0043565
Seca11g06488 281 Coils Coil 185 205 - -
Seca11g06488 281 Pfam Seed dormancy control 39 115 IPR025422 GO:0006351|GO:0043565
Seca11g06488 281 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 23 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06488 Seca-Chr11 165276419 165277264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06488 8 258 bZIP Transcription Factor Family AT5G06950 25.490 1.56e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06488 - - cam:101504084 385.956