Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06451 ATGGCAGATCATTCCAAAAATGAAGTACAAGATATAGTATGTTATTCACCATTTATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTAAACTATTCTCTCCCTCTCCTCATCCTTCAAGTCATGTTAGTTGTGATTGCCACTCGCATATTTGTATTCATACTCAAGCCTATTCGCCAGCCACGTGTTATTGCTGAAATCTTGGGAGGAATACTATTAGGTCCTTCTGTGCTTGGAAGAAACAAAACATTTGCTGATGCAGTATTTCCCTTAAGAAGTGTGATGGTGATTGAAACAATGGCAAATGTTGGTCTCCTATATTTTCTGTTCTTGGTGGGAGTGGAGATGGATGTGTCTTCATTAAGAAGGGTAGGTAAAAAGGCAGTGGCCATAGCAATTGCTGGTATGATCTTGCCTTTTGCCATTGGAGCTATCTTTTCCATCCTTTGGCTAAATAACACTGATAATGGTATTAGGAAAGGTGCTTTCATCCTATTACTTGGTGTTATTCTCTCTGTCACAGCATTCCCTGTGCTTGCTAGGATCCTTGCTGAGCTTAAACTTGTCAACACAGAGATAGGAAGGGTTGCTCTTTCATCTGCACTTATTAATGATATGTGTTCTTGGATACTATTGGCTGTAGCCATTGCTGTGGCTCAGCATGAAAAACCTACTTTTGCTTCCTTTATGGTTCTGTTGTCAACTGTAGCATTTGTGGCCTTTAATATTTTTATTGTGAAACCAGCAATCTTTTGGATAATAAGGAAAACCCCAGAAGGTGAAACATTCAGTGATTTCTATATTTGTTTGATACTAGCAGGTGTTATGATCTCAGGTTTCATGACAGATTTTATTGGAACACATTCTGTTTTTGGAGCTTTTGTGTTTGGTATGACAATCCCACATGGACCACTTGCTCTAGCTCTTGTAGAAAAGCTTGAGGACTTTGTTTCAGGACTTTTGCTCCCTCTCTTTTTTGCCATTAGTGGGCTAAAGACTAATATAGCCCTTGTCACAGGGTTCTTCACATGGGGAACTTTGATCCTTCTGGTTGTTCTGGCTTGCATTGGAAAAATAGCTGGAACTATAATTGCTGCAGTCTATTATCAAATGTCACCTACTGAAGGAGCTGCCCTTGGTTTGCTCATGAACTCAAAAGGCCTTGTTGAAGTTATCTTGCTTAATATTGGTAGGGATTCAAAGCTTTTGGATGAAGGATCATTTGCAATCATGGTGATTATGACTGTGCTAATGACTGCAATAATTGTACCTGGCATATCAGCTATATACAAACCATCATCAAAGGGGTTCATATCTTATAAAAGAAGAACCATTCAAATGTCAAAAAAAGATGCAGAGTTCAGAGTCCTAGTGTGTATCCATACCCCTAGGAATGTCCCTACAATGATCAACCTCCTTGAAGCCTCTAATCCAACAAAGAAGTCACCAATTTGCATCTATGTGCTTCACTTGGTTGAACTTTCTGGTCGTACATCTGCATTGCTCATTGTCCATAACTCTACAAGACCAGATCACCCTGCCCTTAATAGGACTAGAGCTCAATCTGATCACATAATAAATGCTTTTGAAAACTATGAACAACATGCTGATCATGTTTCTGTCCAACCCTTAACAGCAATCTCCCCTTACTCCACCATGCATGAGGATATATGCAATTTGGCTGAGGACAAACGTGTTGCCTTCATAATCATTCCTTTTCATAAACAACAAACAGTTGATGGTGGAATGGAAGTTACAAACATGGCATTTCGCACTGTCAACCAAAATGTGCTAGCTAATGCACCTTGTTCAGTTGGGATTCTAGTGGATAGAGGCTTAAATGGCTCTAACCATATGGCTGCAGATCAAGTTTGTCATAATGTGGCAGTTTTGTTTTTTGGAGGGCCAGATGATAGAGAGGCATTGAGTTATGGTTGGAGAATGTCAGAACATCAAGGGATAAGTCTTACTGTGATGCGTTTTGTTCCAGGGGAAGATATTGTTGGGCCAAGGATGAATCCTAGTCAAAACCAAGATGAACCAAGGATATTGACAGTGGAAACAGATGAGGATACAGAGAAGCAATTTGATGAGAAGCTTATAAATTGGTTTATGGTGAGTCATGCAAATGATGATTCAATTGTTTACATTGAGAAAATGGTTAACAATGGGGAAGAGACAGTGGCAGCAATAAGGTCATTGGGTGATGTTCATGGACTTTTCATAGTTGGAAGAGGCCAAGGAATGATATCACCACTCACAGCAGGACTCACTGATTGGAGTGAATGTCCAGAGTTAGGAGCAATTGGTGATTTGTTAGCATCATCAGATTTTGTAGCAACTGCTTCAGTTATGGTAGTGCAGCAATATATTGGGGCAGGGTCAGAAGGAGATTGGTTAGGGACACCAGATGGTACAACACTCACAAATGAAGAATTTGTCAATCAGATAAGCCATCATTCAACACCACCAAAGGGGCATACTGTGTTCAATACAGAACACTTATGA 2514 0.399 MADHSKNEVQDIVCYSPFMITTNGIWQGDNPLNYSLPLLILQVMLVVIATRIFVFILKPIRQPRVIAEILGGILLGPSVLGRNKTFADAVFPLRSVMVIETMANVGLLYFLFLVGVEMDVSSLRRVGKKAVAIAIAGMILPFAIGAIFSILWLNNTDNGIRKGAFILLLGVILSVTAFPVLARILAELKLVNTEIGRVALSSALINDMCSWILLAVAIAVAQHEKPTFASFMVLLSTVAFVAFNIFIVKPAIFWIIRKTPEGETFSDFYICLILAGVMISGFMTDFIGTHSVFGAFVFGMTIPHGPLALALVEKLEDFVSGLLLPLFFAISGLKTNIALVTGFFTWGTLILLVVLACIGKIAGTIIAAVYYQMSPTEGAALGLLMNSKGLVEVILLNIGRDSKLLDEGSFAIMVIMTVLMTAIIVPGISAIYKPSSKGFISYKRRTIQMSKKDAEFRVLVCIHTPRNVPTMINLLEASNPTKKSPICIYVLHLVELSGRTSALLIVHNSTRPDHPALNRTRAQSDHIINAFENYEQHADHVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEVTNMAFRTVNQNVLANAPCSVGILVDRGLNGSNHMAADQVCHNVAVLFFGGPDDREALSYGWRMSEHQGISLTVMRFVPGEDIVGPRMNPSQNQDEPRILTVETDEDTEKQFDEKLINWFMVSHANDDSIVYIEKMVNNGEETVAAIRSLGDVHGLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFVATASVMVVQQYIGAGSEGDWLGTPDGTTLTNEEFVNQISHHSTPPKGHTVFNTEHL. 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06451 837 Gene3D - 38 437 IPR038770 -
Seca11g06451 837 PANTHER CATION/H + ANTIPORTER 13 793 - -
Seca11g06451 837 Pfam Sodium/hydrogen exchanger family 46 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca11g06451 837 Gene3D - 480 758 - -
Seca11g06451 837 FunFam Cation/H(+) antiporter 15 38 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06451 Seca-Chr11 164923730 164926496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06451 12 813 Antiporter Super Family AT2G13620 66.334 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06451 K26731 - pvy:116140351 1188.33