Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06435 ATGGCTCCTCTCTTCTCCCTCTCTCTTTTGAGTCTTTCCCTCTTCCTCATCACCCTCTCCTCTGCCTCCCACCATAGCCACCCCTCTCCCTTTCCCTCTCCCAAACCCAAACCCTCCCTCTCCACCAATGCCACGCCGGAGATCCAGCAAGCCTGCAAGGCCACCCGTTTCCCTCAACAATGTGAATCATCCCTCTCCCAATCCAACCACCTCCCCTCAAACCCGACCTCTCTCCAACTTCTCCAATCCGCCATCGCCATCTCCTCCGAAAACCTCGTCACCGCCCAATCCATGGTGAAGTCCATCCTCGACTCCTCCGCCGCAAGCCGCAACCGCACCGTCGCCGCAACCACCTGCCTCGAGGTCCTCAACAACTCTCAGCACCGCATTTCCCTCGCTACCGACGCCCTGCCACGTGGCAGGACCAAGGACGCACGCGCGTGGCTGAGCGCCGCCCTCGTTTACCAGTACGACTGCTGGAACGGCCTCAAGTACGCAAACGACAGCCGCGCGGTGGGCGAAGCGATGTCGTTTTTCGAATCCCTATACACGCTATCCAGCAACGCACTCAGCATTGCGTTTTCGTACGACGTGTACGGAAACGAGACCGCATCATGGAAGCCTCCCGCGACGGAGCGGGACGGGTTATGGGAGGCATCCGGGTCGGGAAGCGGGTCGGTGCCAGGGATTCCGTCGACGTTGACGCCAGACGTTACGGTCTGTAAGGAAGGAGGGAACGAGTGTTACAAAACAGTGCAGGAAGCGGTTAACGCAGCACCGGATAACGGCGCTGACGGGAAGAAGTTTGTGATATACATAAAAGAAGGGGTTTATGAAGAGACCGTTAGGGTTCCGTTAGAGAAGAGGAATGTAGTGTTCTTAGGAGACGGAATGGGGAAAACGGTCATCACTGGTTCTGCAAACGTAGGCCAACCCGGGATGACAACTTACAATTCAGCCACACTTGCGGTTCTTGGAGATGGATTCATGGCAAAGGATCTCACAATCCAAAACACAGCAGGTCCTGATGCACACCAAGCAGTGGCGTTCAGATTAGACAGTGATCTCTCTGTAATTGAGAATTGTGAATTCATTGGAAATCAAGATACTCTTTATGCTCATTCCCTACGCCAATTTTACAAATCATGCCGCATTGTAGGCAATGTGGACTTCATCTTTGGAAACTCTGCTGCGATTTTCCAAGACTGTGAGATCCTGGTTTGTCCCAGGCAATTGAAGCCTGAGAAAGGAGAGAACAATGCCATCACGGCGCATGGTAGAACAGACCCTGCACAGAGTACAGGGTTTGTTTTCCAGAACTGCTTGATTAATGGAACAGAGGATTACATGGCTTTGTATCATAGCAAGCCTCAAGTGCATAAGAACTACTTAGGCAGGCCGTGGAAGGAATATTCTAGAACTGTTTTTATTAATTCGTTGTTGGAAGCGCTTGTGACTCCTCAGGGTTGGATGCCATGGAGTGGTGACTTTGCGCTCAAGACACTTTACTATGGGGAATTTGAGAATTCAGGACCTGGTTCTGATTTGTCTCAGAGGGTGCCTTGGAGTAGTAAGGTCCCTGCTGAGCATGTGTTTACGTATTCAGTGCAGAATTTCATTCAAGGAGATGAGTGGATACCATCATCTAATCGTAGGACAAGTAGGGGACATTAG 1674 0.5185 MAPLFSLSLLSLSLFLITLSSASHHSHPSPFPSPKPKPSLSTNATPEIQQACKATRFPQQCESSLSQSNHLPSNPTSLQLLQSAIAISSENLVTAQSMVKSILDSSAASRNRTVAATTCLEVLNNSQHRISLATDALPRGRTKDARAWLSAALVYQYDCWNGLKYANDSRAVGEAMSFFESLYTLSSNALSIAFSYDVYGNETASWKPPATERDGLWEASGSGSGSVPGIPSTLTPDVTVCKEGGNECYKTVQEAVNAAPDNGADGKKFVIYIKEGVYEETVRVPLEKRNVVFLGDGMGKTVITGSANVGQPGMTTYNSATLAVLGDGFMAKDLTIQNTAGPDAHQAVAFRLDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIVGNVDFIFGNSAAIFQDCEILVCPRQLKPEKGENNAITAHGRTDPAQSTGFVFQNCLINGTEDYMALYHSKPQVHKNYLGRPWKEYSRTVFINSLLEALVTPQGWMPWSGDFALKTLYYGEFENSGPGSDLSQRVPWSSKVPAEHVFTYSVQNFIQGDEWIPSSNRRTSRGH. 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06435 557 FunFam Pectinesterase 231 557 - -
Seca11g06435 557 CDD PMEI-like_3 51 192 - -
Seca11g06435 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 192 IPR035513 -
Seca11g06435 557 Pfam Pectinesterase 237 543 IPR000070 GO:0030599|GO:0042545
Seca11g06435 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 195 IPR035513 -
Seca11g06435 557 PANTHER PECTINESTERASE 17 547 - -
Seca11g06435 557 NCBIfam pectinesterase inhibitor domain 10 192 IPR006501 GO:0004857
Seca11g06435 557 Pfam Plant invertase/pectin methylesterase inhibitor 48 192 IPR006501 GO:0004857
Seca11g06435 557 SUPERFAMILY Pectin lyase-like 233 550 IPR011050 -
Seca11g06435 557 Gene3D - 231 556 IPR012334 -
Seca11g06435 557 SMART PMEI_2 43 192 IPR006501 GO:0004857
Seca11g06435 557 FunFam Probable pectinesterase/pectinesterase inhibitor 51 46 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06435 Seca-Chr11 164701978 164703736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06435 41 545 Carbohydrate Esterase AT5G09760 67.057 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06435 - - mtr:11442613 891.338