Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06413 ATGACAGGAAACAAGCCCTATCTTGTTGTGATCACCATTCAAGCCATTTATGCTGTCATGTTTTTGCTCTCAAAAGCTGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAAGCTGCTGCAACCATTTTCCTAATCCCCTTCGCTTTCTTCTTCGAACGGAAGACTGCACCGCCTTTATCATTCATGACCTTCTGCAAGATCTTCTTTATTTCTCTCATTGGGATAACTGCGAGCTTAGACATATATGGTATTGCTCTAATTAACACTTCTGCAACTTTGGCTGCTGCTACTGCAAACTGTCTTCCAGTTATTACCTTCTTCTTAGCTCTCCTACTCAGGATTGAAGTTTTGAAAGTAAAGACAGCCCCTGGGATTGCTAAGTTGGTTGGCATTGTGGCATGCTTGGCTGGAGCAGCAACACTTGCTTTTTATAAAGGTCCTCACTTGGAACTTTTGAGCCATCTTCACCTTTTGGGGTACCATAAAAGCCAACACCCTCATGGACAGGGTACTAGTGTTCCATCTGGGTCATGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAATACCTTTTGGGGAATGTGGCTTGTACTACAAACTTTTGTGATAAAAGGGTACCCTTCAAAGCTGCTATTCACAACTCTTCAGTGTTTGTTAAGTTCAATTCAATCTCTGGTCATTGCATTGGCAGTAGAAAGAGACATTGAGCAATGGAAGTTGGGTTGGAATGTCAGACTCCTCTCTGTAATATATTGTGGAATTATGGTGACTGGTGTGACATATTACTTACAAACATGGGTGATAGAGAAGAAAGGACCAGTGTTTCTAGCCATGTCAACACCACTTGCTCTCATCATGACCATTTTCGCCTCCGCATTTCTCTTAGGCGAGATGATAACTTTGGGAAGCCTTTTAGGTGGCATTGCTTTGGTTCTAGGATTGTACTGCGTGTTGTGGGGAAAGAGCAGAGAGCAAATGCCCAAAGCCTCATTAGATTTGGAGCAACAAGCATCGGGTTAG 1035 0.43 MTGNKPYLVVITIQAIYAVMFLLSKAAFDHGMNNFIFVFYRQAAATIFLIPFAFFFERKTAPPLSFMTFCKIFFISLIGITASLDIYGIALINTSATLAAATANCLPVITFFLALLLRIEVLKVKTAPGIAKLVGIVACLAGAATLAFYKGPHLELLSHLHLLGYHKSQHPHGQGTSVPSGSWIKGCFLMLLSNTFWGMWLVLQTFVIKGYPSKLLFTTLQCLLSSIQSLVIALAVERDIEQWKLGWNVRLLSVIYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALIMTIFASAFLLGEMITLGSLLGGIALVLGLYCVLWGKSREQMPKASLDLEQQASG. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06413 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Seca11g06413 344 PANTHER WAT1-RELATED PROTEIN 5 331 IPR030184 GO:0016020|GO:0022857
Seca11g06413 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 328 - -
Seca11g06413 344 Pfam EamA-like transporter family 5 144 IPR000620 GO:0016020
Seca11g06413 344 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06413 Seca-Chr11 164451468 164455192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06413 1 257 Nodulin-like Gene Family AT5G64700 64.231 2.67e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06413 - - ccaj:109799350 573.933