Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06382 ATGTCAACAACTACTACTTCTCAAGCTATTGTTAACCATAGCTTATTTGAGGAGCAAAATCAGATGATGCCTATGCAAATGGGTTTCAATATTCCTTTCCCAACAAACCTAACCTTTCAAGCTCCTTTGGGTTGCAATAATATTCATCAATCTTTGAAAGCTTTCAGTTCCATAGCCTCTTCACTTGCATCTGAAGATTCAACATCAAATCTAACAGAAACCCTATTCTCAAACACTGATCATCATCATCATCAAAAATCAAGAGAATACCTAACTTCTAGCTTTTGTGGAGCTCAATTCCTTTCCTTGCATAGATCAAGTGTAAATCCATGGGCATTGGGAGAAGTAACTGATTGTTTCAGTAGTAAAAAAAGTGGTGATGATCATCATCTTGGAATCTCTGCCATGAAGATGAAAAAAATGAAGGCAAGAAGGAAGGTGAGAGAGCCAAGGTTTTGCTTCAAGACCATGAGTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGAAAGTATGGTCAGAAAGTAGTGAAGAACACACAGCACCCCAGAAGCTACTACCGTTGCACACAAGATAATTGTCGAGTTAAGAAACGTGTGGAGCGGTTAGCGGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGCACACTCTCCATCTAATGATCTTGAAGACTCTCAAACTCCATCTCAATTTACCAATTTCTTATGGTAG 723 0.3942 MSTTTTSQAIVNHSLFEEQNQMMPMQMGFNIPFPTNLTFQAPLGCNNIHQSLKAFSSIASSLASEDSTSNLTETLFSNTDHHHHQKSREYLTSSFCGAQFLSLHRSSVNPWALGEVTDCFSSKKSGDDHHLGISAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQTPSQFTNFLW. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06382 240 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 224 IPR044810 GO:0003700
Seca11g06382 240 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06382 240 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06382 240 SUPERFAMILY WRKY DNA-binding domain 155 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06382 240 Gene3D WRKY domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06382 240 FunFam WRKY transcription factor 57 149 223 - -
Seca11g06382 240 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06382 Seca-Chr11 164170271 164172271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06382 133 240 WRKY Transcription Factor Family AT4G39410 76.991 4.27e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca11g06382 WRKY 6.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06382 - - pvu:PHAVU_002G266400g 350.517