Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06372 ATGGATGACTACTATTTTGTAAACCCTCATCCTCACCCCAATTATGCTCACTCTGCTGCTATGACTCTACCCTCCTCTGAGTTCATACTATCCGATTTTCTCATGCTCGATGATTGTGCTGATCATCATCAAGATTCTCAATCACAAAGTACTGAATCATCGGAGAAGGTATCCTTCAGCGATGCTAGTCACGGATTCAATGGAGCAACCTCTAAGAACAATAACATGCAAGTAAAATGCAAAAATGGGATTAGGAAAAATAAGGAAGAGGTGAGGCAGAGGATAGCGTTTAGAACCAGATCAGAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCCGTGAAGAACAGTCCGAATCTAAGGAACTACTATAAATGTTCAAGTGGAGGATGCAATGTGAAGAAAAGGGTGGAAAGGGATAGAGATGACTCGAGCTATGTGATAACGACTTACGAAGGCGTGCACAATCATGAGAGTCCATTTACTACCTACTCCAGCCAAATCTCCTTCGCACATCCTCATTTTGATGCTTCTTGA 555 0.418 MDDYYFVNPHPHPNYAHSAAMTLPSSEFILSDFLMLDDCADHHQDSQSQSTESSEKVSFSDASHGFNGATSKNNNMQVKCKNGIRKNKEEVRQRIAFRTRSELEIMDDGYKWRKYGKKSVKNSPNLRNYYKCSSGGCNVKKRVERDRDDSSYVITTYEGVHNHESPFTTYSSQISFAHPHFDAS. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06372 184 Gene3D WRKY domain 91 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06372 184 SUPERFAMILY WRKY DNA-binding domain 98 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06372 184 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06372 184 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06372 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 169 IPR044810 GO:0003700
Seca11g06372 184 MobiDBLite consensus disorder prediction 44 75 - -
Seca11g06372 184 FunFam WRKY transcription factor 57 92 166 - -
Seca11g06372 184 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06372 184 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06372 Seca-Chr11 164024878 164026859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06372 7 180 WRKY Transcription Factor Family AT5G64810 43.169 1.82e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca11g06372 WRKY 9.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06372 - - gmx:100500248 256.914