Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06354 ATGATTTTGATAGCATTTTGTGCACCACCAAATAGCTTGGATATGATTTTGATAGCATTTTGTTTTGTATGTCTTACTTCTCTGTGGCTATGGAGAACCAGCAACAATGCAAAGAAATTACCTCCAGGTCCAAGAGGATTGCCAATTTTGGGGAGCCTTCATAAGTTGGGTGCAAATCCTCATCGTGATCTGCACCAATTATCTCAAAAACATGGACCTATCATGTTCTTGCGCTTAGGTTTTGTGCCAACCATAGTTGTTTCTTCACCACAAGCTGCTCAACTGTTCTTAAAGACCCATGACCTTGTGTTTGCTAGTAGACCACTTCATGAGGCTGCAAAGTACATATCTTGGGAGCAGAGGAACTTGAGCTTTGGTAAATATGGTTCTTATTGGCGCAACATGCGTAAGATGTGCACTTTGGAATTGCTAAGCCAAACCAAAATTAACTCCTTCAAACCCATCAGGGAAGAGGAGCTTGACCTTTTGATCAAGCTTCTAAGAAAGGCAGCCAATGATGGAGCTGATGTTGATGTTAGTGCCAAAATTTCAACACTGACTGCAGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTACATGGACCATGACTTGGATGAGAAAGGTTTCAAGGCTGTTATGCAAGAGGCAATGAATTTAGGAGCAACACCTAACATTGGTGATTACATTCCTTATATTGCTGCACTTGACCTTCAAGGACTAACTAAGCGCATGAAGGCAGTGCACAAAATCTTCGATGATTTCTTTGAGAAAATTATTGATGAACATATACATATGCAATCAGACAATGAAGAAGATAAGATCAAGGATTTTGTGGATATCATGTTAGGCTTTGTTGGTACTGAAGAATCTGAGTACAGGATTGAAAGGCCCAATATCAAAGCCATATTGCTGGATATGCTGGAGGGTTCAATGGATACTTCTGCTACAGCAATTGAGTGGGCAATTTCAGAGCTACTCAAGCATCCAAAGGTGATGAAGAAAGTCCAAATGGAGTTGGAAACCATGGTGGGTATGAAAAGGAAGGTGGAGGAGTCTGACTTGGACAAGTTGGAGTATTTGGATATGGTTATAAAGGAAAGCTTTAGGATCCATCCAGTGGGACCATTACTAATACCACACCAATCTGTGGAAGATTGCATGGTTGGAGAATATTTCATACCAAAAAACTCAAGGGTGATAGTAAATGCATGGGCAATAATGAGAGACCCAAGTGCTTGGACTGAGGCAGAGAAGTTCTGGCCTGAGAGATTTGAGGGAAGCAACATAGATGTGAGAGGGCGTGACTTTGAGCTGATACCATTTGGTTCTGGCAGAAGGGGTTGTCCTGGATTGCAATTGGGTCTAACAGTGGTTCTTTAG 1383 0.4158 MILIAFCAPPNSLDMILIAFCFVCLTSLWLWRTSNNAKKLPPGPRGLPILGSLHKLGANPHRDLHQLSQKHGPIMFLRLGFVPTIVVSSPQAAQLFLKTHDLVFASRPLHEAAKYISWEQRNLSFGKYGSYWRNMRKMCTLELLSQTKINSFKPIREEELDLLIKLLRKAANDGADVDVSAKISTLTADMSCRMVLGKKYMDHDLDEKGFKAVMQEAMNLGATPNIGDYIPYIAALDLQGLTKRMKAVHKIFDDFFEKIIDEHIHMQSDNEEDKIKDFVDIMLGFVGTEESEYRIERPNIKAILLDMLEGSMDTSATAIEWAISELLKHPKVMKKVQMELETMVGMKRKVEESDLDKLEYLDMVIKESFRIHPVGPLLIPHQSVEDCMVGEYFIPKNSRVIVNAWAIMRDPSAWTEAEKFWPERFEGSNIDVRGRDFELIPFGSGRRGCPGLQLGLTVVL. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06354 460 PANTHER CYTOCHROME P450 93A3-LIKE 16 459 - -
Seca11g06354 460 Gene3D Cytochrome P450 29 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 SUPERFAMILY Cytochrome P450 41 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 CDD CYP71-like 70 459 - -
Seca11g06354 460 Pfam Cytochrome P450 41 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Seca11g06354 460 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS E-class P450 group I signature 449 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g06354 460 FunFam Cytochrome P450 83B1 28 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06354 Seca-Chr11 163874355 163875859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06354 13 459 Cytochrome P450 AT5G07990 39.560 3.49e-117 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06354 K20562 - gmx:100809526 742.265